Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.09□□□□□ -1.75
ZIC3O60481 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.09□□□□□ -1.75
ZIC3O60481 MTND2P19-201ENST00000449129 1012 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZIC3O60481 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.09□□□□□ -1.75
ZIC3O60481 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.09□□□□□ -1.75
ZIC3O60481 RPL18AP17-201ENST00000455326 198 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.09□□□□□ -1.75
ZIC3O60481 CYCSP34-201ENST00000458172 304 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AL591473.1-201ENST00000464297 313 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AP000893.1-201ENST00000474462 794 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AC013828.1-201ENST00000481845 158 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.09□□□□□ -1.75
ZIC3O60481 ATP1B1P1-201ENST00000509767 915 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.09□□□□□ -1.75
ZIC3O60481 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.09□□□□□ -1.75
ZIC3O60481 AC117532.1-201ENST00000514638 323 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.09□□□□□ -1.75
ZIC3O60481 RNA5SP446-201ENST00000515955 82 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 RNU6-678P-201ENST00000516832 109 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.09□□□□□ -1.75
ZIC3O60481 AC074051.3-201ENST00000570238 358 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 SNORD39.3-201ENST00000584451 71 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.09□□□□□ -1.75
ZIC3O60481 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.09□□□□□ -1.75
ZIC3O60481 BPIFA4P-203ENST00000603168 689 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.09□□□□□ -1.75
ZIC3O60481 OR2AS2P-201ENST00000606902 342 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AP001521.1-201ENST00000609150 300 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AC012409.3-201ENST00000611343 981 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 RNU6-156P-201ENST00000621869 107 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AC091931.1-201ENST00000623488 728 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 AF246928.1-201ENST00000623768 87 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ZIC3O60481 AC139792.2-201ENST00000624218 587 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 FP325313.1-201ENST00000638228 703 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.09□□□□□ -1.75
ZIC3O60481 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ZIC3O60481 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
ZIC3O60481 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ZIC3O60481 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZIC3O60481 AL390862.1-201ENST00000635467 1469 ntBASIC4.09□□□□□ -1.75
ZIC3O60481 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
ZIC3O60481 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.09□□□□□ -1.76
ZIC3O60481 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
ZIC3O60481 A2MP1-204ENST00000566278 4130 ntBASIC4.09□□□□□ -1.76
ZIC3O60481 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.09□□□□□ -1.76
ZIC3O60481 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
ZIC3O60481 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 OR4A15-201ENST00000314706 1035 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 RNA5SP447-201ENST00000363749 119 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ZIC3O60481 RNU6-178P-201ENST00000384631 104 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.08□□□□□ -1.76
ZIC3O60481 RPL23AP29-201ENST00000397284 453 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 MIR921-201ENST00000401133 56 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 ELOCP19-201ENST00000411919 318 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.08□□□□□ -1.76
ZIC3O60481 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 Z74021.1-201ENST00000423610 407 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.08□□□□□ -1.76
ZIC3O60481 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.08□□□□□ -1.76
ZIC3O60481 AC023347.2-201ENST00000433994 462 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.08□□□□□ -1.76
ZIC3O60481 AL353597.2-202ENST00000434901 373 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.08□□□□□ -1.76
ZIC3O60481 GEMIN8P3-201ENST00000445417 720 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC012671.1-201ENST00000451912 203 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.08□□□□□ -1.76
ZIC3O60481 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.08□□□□□ -1.76
ZIC3O60481 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.08□□□□□ -1.76
ZIC3O60481 RPL31P3-201ENST00000458430 332 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC092754.2-201ENST00000463506 460 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC108751.2-201ENST00000469993 231 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC093281.2-201ENST00000510153 597 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 LTV1P1-201ENST00000510683 1237 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.08□□□□□ -1.76
ZIC3O60481 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.08□□□□□ -1.76
ZIC3O60481 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.08□□□□□ -1.76
ZIC3O60481 SMARCE1P4-201ENST00000523647 241 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.08□□□□□ -1.76
ZIC3O60481 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.08□□□□□ -1.76
ZIC3O60481 CYCSP28-201ENST00000534284 321 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ZIC3O60481 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.08□□□□□ -1.76
ZIC3O60481 AL389895.1-201ENST00000554127 252 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.08□□□□□ -1.76
ZIC3O60481 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.08□□□□□ -1.76
ZIC3O60481 AL512347.1-201ENST00000566420 503 ntBASIC4.08□□□□□ -1.76
ZIC3O60481 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms