Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.84□□□□□ -1.79
SLC28A1O00337 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AC091516.1-201ENST00000549191 703 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 MIR5096-201ENST00000583713 70 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC28A1O00337 MIR4443-201ENST00000585052 53 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AP001542.2-201ENST00000593141 364 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 AC104785.1-201ENST00000603220 588 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 AC124016.2-201ENST00000610058 665 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 AC004825.2-201ENST00000616634 455 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SLC28A1O00337 AL139089.1-201ENST00000620372 975 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 AC011944.2-201ENST00000624440 683 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 AC010608.2-201ENST00000624830 470 ntBASIC3.84□□□□□ -1.79
SLC28A1O00337 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC28A1O00337 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC28A1O00337 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC28A1O00337 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.8
SLC28A1O00337 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.8
SLC28A1O00337 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SLC28A1O00337 FAM35DP-201ENST00000323387 2712 ntBASIC3.84□□□□□ -1.8
SLC28A1O00337 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC28A1O00337 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC28A1O00337 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.84□□□□□ -1.8
SLC28A1O00337 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SLC28A1O00337 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC28A1O00337 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC28A1O00337 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SLC28A1O00337 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC28A1O00337 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AL603865.2-201ENST00000401679 213 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 RPL7P27-201ENST00000403775 720 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 GSTA8P-201ENST00000404253 637 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AC069218.2-201ENST00000411665 344 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 RPS3AP9-201ENST00000417027 792 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC093698.1-201ENST00000423843 571 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 RPP40P1-201ENST00000426762 456 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 DNAJC19P7-201ENST00000428811 344 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 RPL23AP33-201ENST00000442301 452 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC28A1O00337 EIF2S2P2-201ENST00000447161 982 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 RPL7P59-201ENST00000447700 943 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 Z99714.1-201ENST00000450463 807 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC28A1O00337 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AP000926.1-201ENST00000479573 241 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC28A1O00337 RPL7P24-201ENST00000493052 752 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC28A1O00337 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC28A1O00337 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC28A1O00337 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 HIGD1AP3-201ENST00000515857 278 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC28A1O00337 AP001207.1-201ENST00000524051 481 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AP003102.1-201ENST00000525638 661 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 OR8K4P-201ENST00000534608 872 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AGGF1P8-201ENST00000562979 1000 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 MIR4277-201ENST00000578298 84 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC011492.1-201ENST00000600023 315 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 RPAP2P1-201ENST00000603626 1168 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AC007566.2-201ENST00000603642 413 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 BNIP3P31-201ENST00000604515 566 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AC112503.1-201ENST00000608436 391 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 AL512427.1-201ENST00000618593 349 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SLC28A1O00337 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC28A1O00337 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC28A1O00337 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AC008725.1-201ENST00000605123 2263 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SLC28A1O00337 SAGE4P-201ENST00000442271 3381 ntBASIC3.83□□□□□ -1.8
SLC28A1O00337 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SLC28A1O00337 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC28A1O00337 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SLC28A1O00337 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms