Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AC084373.1-201ENST00000603311 235 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AC012409.3-201ENST00000611343 981 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR6774-201ENST00000614651 70 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR6829-201ENST00000620375 67 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AL357559.1-201ENST00000622228 274 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AC007342.8-201ENST00000623278 678 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AP003355.3-201ENST00000623465 114 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AL049767.1-202ENST00000637826 242 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 AP000553.6-201ENST00000641242 118 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 OR56B2P-202ENST00000641377 2453 ntBASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHKB-CPT1BH3BT56 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 MTCO1P24-201ENST00000515438 1558 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 CASC19-261ENST00000641853 1638 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SKP149-201ENST00000363008 344 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 RNA5SP393-201ENST00000363423 117 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 DEFB109C-201ENST00000382575 264 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 DEFB109B-201ENST00000382656 264 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AL590290.1-201ENST00000405336 380 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SKP220-201ENST00000410611 288 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 NRBF2P2-201ENST00000413087 861 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 MTCYBP7-201ENST00000419540 1134 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 RCC2P2-201ENST00000422174 918 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 CST9LP2-201ENST00000437612 320 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 Z99127.3-201ENST00000448158 395 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC097262.1-201ENST00000452559 548 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC234775.1-201ENST00000454247 670 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AL445669.2-201ENST00000454425 421 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC092324.1-201ENST00000468671 324 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 RN7SL717P-201ENST00000478343 297 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC111000.2-201ENST00000507775 550 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC147055.3-201ENST00000510547 851 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 MTCYBP37-201ENST00000510642 1133 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC008958.1-201ENST00000511047 682 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC093840.1-201ENST00000511599 336 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 RNA5SP76-201ENST00000516277 87 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 RNU6-1073P-201ENST00000517182 106 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC025423.2-201ENST00000537570 439 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 ELOCP31-201ENST00000540463 467 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC008782.1-201ENST00000603386 430 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC069304.3-201ENST00000603938 1084 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 TEX41-238ENST00000604253 709 ntTSL 5 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 HSPE1P14-201ENST00000605812 302 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC022467.1-201ENST00000614738 749 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AL161637.1-201ENST00000622380 412 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AP003122.6-201ENST00000623831 495 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC010297.1-201ENST00000623948 149 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 CR392039.4-201ENST00000624968 501 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AL121594.5-201ENST00000631724 573 ntBASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CHKB-CPT1BH3BT56 AC007656.2-201ENST00000624902 4547 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AP001350.1-201ENST00000601906 1524 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 AC091564.4-201ENST00000533934 2194 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 RNA5SP507-201ENST00000363603 121 ntBASIC1.81□□□□□ -2.12
CHKB-CPT1BH3BT56 SNORD113.2-201ENST00000364166 89 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms