Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC010285.3-201ENST00000511668 676 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 CCDC58P3-201ENST00000590792 430 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 BNIP3P22-201ENST00000593399 556 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AC144521.1-201ENST00000607148 956 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AC024933.1-201ENST00000608472 348 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 AC116563.2-201ENST00000624751 535 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC02471-203ENST00000641941 4752 ntBASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEDD8-MDP1E9PL57 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 ZNF849P-201ENST00000594711 1566 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 SEC63P2-201ENST00000503863 1939 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 SNORD3H-201ENST00000384486 214 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 MIR513A2-201ENST00000385249 127 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 MIR199A2-201ENST00000385289 110 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 SNORD65C-201ENST00000390962 71 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 RPL21P17-201ENST00000397467 475 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AL355615.1-201ENST00000406187 641 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC013410.2-201ENST00000422627 201 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AL139247.1-201ENST00000422768 325 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 RPS7P2-201ENST00000435134 607 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC000041.1-201ENST00000439655 175 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AL645931.1-201ENST00000439737 410 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AL133162.1-201ENST00000463228 453 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 S100A11P1-201ENST00000477525 312 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC139783.2-201ENST00000504847 1145 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 HMGN1P11-201ENST00000508668 303 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 RNU1-95P-201ENST00000516357 160 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 RNU1-128P-201ENST00000516704 160 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 IGKV2-36-201ENST00000519999 223 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 ATP5F1P7-201ENST00000567330 760 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC008507.2-201ENST00000588402 1176 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 BNIP3P39-201ENST00000601077 554 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC008739.3-201ENST00000603262 127 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AC022306.3-201ENST00000619930 550 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 ATE1-AS1-202ENST00000636460 506 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AL031985.3-201ENST00000565390 2449 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 AL353743.4-201ENST00000422653 1547 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 HSPA8P19-201ENST00000505359 1517 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 MAPK10-253ENST00000641010 4072 ntBASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEDD8-MDP1E9PL57 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC011155.1-201ENST00000316512 456 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 RN7SKP44-201ENST00000363602 316 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 RNU6-1279P-201ENST00000383917 103 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 SNORA5A-201ENST00000384111 134 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 MIR449B-201ENST00000384995 97 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 RNU6-932P-201ENST00000391108 106 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AC092745.2-202ENST00000411880 369 ntBASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.93□□□□□ -1.78
NEDD8-MDP1E9PL57 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms