Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 MTCYBP19-201ENST00000517463 1124 ntBASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 U4.6-201ENST00000621618 127 ntBASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
NPC1L1Q9UHC9 PRO1804-201ENST00000623780 2050 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC074029.4-201ENST00000624796 1859 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 BX005019.1-201ENST00000561881 1810 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 MTND4P10-201ENST00000446199 1363 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 OR5T3-201ENST00000303059 1023 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 RNU4-35P-201ENST00000362588 141 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 SNORA27.3-201ENST00000364937 134 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 OR6K3-202ENST00000368146 996 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC093719.1-202ENST00000392735 373 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 RHEBP3-201ENST00000411920 351 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 RPS7P15-201ENST00000415804 584 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC093698.1-201ENST00000423843 571 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 HSFY1P1-201ENST00000423928 1178 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC239809.1-201ENST00000450470 217 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 RPL5P13-201ENST00000462840 709 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC093663.1-201ENST00000497190 394 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC021146.7-201ENST00000509604 775 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC005476.1-201ENST00000554427 397 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 RPL21P12-201ENST00000559810 515 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AL031985.2-201ENST00000600955 480 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 AC243756.2-201ENST00000618406 463 ntBASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPC1L1Q9UHC9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NPC1L1Q9UHC9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
NPC1L1Q9UHC9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AL034374.1-201ENST00000406329 351 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 CYCSP32-201ENST00000440548 321 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AC090543.1-201ENST00000492168 485 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AC021087.2-201ENST00000504656 1203 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 GMPSP1-201ENST00000514075 579 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 NPM1P35-201ENST00000533043 868 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AC106785.3-201ENST00000564064 847 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AL139286.1-201ENST00000604465 483 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AC135803.1-201ENST00000608748 565 ntBASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.71□□□□□ -1.66
NPC1L1Q9UHC9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 MIR423-201ENST00000362201 94 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 RNU6-883P-201ENST00000384597 107 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 MIR3074-201ENST00000384885 81 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 MIR634-201ENST00000385208 97 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 HSPD1P16-201ENST00000402302 394 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AC073063.1-201ENST00000434352 607 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AC245517.2-201ENST00000442890 346 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AC106872.2-201ENST00000494303 480 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms