Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 MTCO3P11-201ENST00000455103 774 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 RPS29P33-201ENST00000456717 146 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC068724.1-201ENST00000487100 792 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AL024509.2-201ENST00000493462 493 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC105031.1-201ENST00000518550 476 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 MIR3667-201ENST00000581025 74 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC110743.1-201ENST00000584870 478 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AL020997.2-201ENST00000602607 184 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC112220.3-201ENST00000605502 502 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC007497.1-201ENST00000610421 561 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC023509.5-201ENST00000617434 807 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC000123.2-201ENST00000623124 461 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC016717.3-201ENST00000624730 554 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 DDX18P4-201ENST00000511690 1966 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 Z99496.1-201ENST00000469424 1477 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AC008758.3-201ENST00000507003 1829 ntBASIC4.92□□□□□ -1.62
DKK3Q9UBP4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
DKK3Q9UBP4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 SAMMSON-226ENST00000642089 1582 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC015813.6-201ENST00000624409 5808 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 MIR1303-201ENST00000408625 86 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 RN7SKP100-201ENST00000411258 284 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 RPS15AP38-201ENST00000413110 372 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL450992.3-201ENST00000413192 568 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL161449.1-201ENST00000414531 1199 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC013429.2-201ENST00000418798 781 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL138785.1-201ENST00000425821 331 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL050321.1-201ENST00000432363 400 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 RPL35AP21-201ENST00000437667 333 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC092641.1-201ENST00000440229 772 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 MTCO1P19-201ENST00000443487 500 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 COX6CP2-201ENST00000444980 225 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL031584.1-201ENST00000447169 754 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC239809.1-201ENST00000450470 217 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 DDX39BP2-208ENST00000453923 258 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 MTND1P16-201ENST00000465177 898 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC063943.1-201ENST00000465434 453 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 NCOR1P1-202ENST00000486162 291 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC109486.1-201ENST00000486833 374 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC098799.3-201ENST00000506095 438 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 RNU6-720P-201ENST00000516363 108 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AP000873.5-201ENST00000533906 236 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL110118.1-201ENST00000553543 400 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 UBE2FP2-201ENST00000566646 462 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC006362.1-201ENST00000567392 174 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC090312.2-201ENST00000582687 378 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 VN1R92P-201ENST00000598511 928 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL512782.1-201ENST00000603093 364 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 RNF138P2-201ENST00000603490 592 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL136363.2-201ENST00000604173 851 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL139286.2-201ENST00000606838 396 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC069209.1-201ENST00000619282 651 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC073348.1-201ENST00000623002 331 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AC073869.10-201ENST00000642016 354 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 AL353743.4-201ENST00000422653 1547 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.91□□□□□ -1.62
DKK3Q9UBP4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.91□□□□□ -1.62
DKK3Q9UBP4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms