Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RPL23AP27-201ENST00000415161 451 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 Z97055.1-201ENST00000419730 712 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AL139148.1-201ENST00000427122 680 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 SKP1P1-201ENST00000438081 489 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 USP9YP12-201ENST00000450481 570 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AL035090.1-201ENST00000454835 332 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 BX322784.1-201ENST00000455793 1077 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 SNORD42A-201ENST00000459584 64 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 OR9M1P-201ENST00000459641 921 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC090142.1-201ENST00000465776 462 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC104563.1-201ENST00000476147 376 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 RPL7P24-201ENST00000493052 752 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 RN7SL808P-201ENST00000496066 299 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC093767.1-201ENST00000504523 156 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC108064.1-201ENST00000513791 460 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 RN7SKP298-201ENST00000515950 94 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 MTND1P5-201ENST00000517906 940 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 MTND4LP18-201ENST00000526864 291 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AP002748.2-201ENST00000528671 348 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 HMGN2P6-201ENST00000551091 273 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC027807.1-201ENST00000559921 996 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC084757.1-201ENST00000559987 490 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC011840.5-201ENST00000582125 771 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AP001180.3-201ENST00000582221 145 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 MIR4307-201ENST00000582802 84 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 RN7SL435P-201ENST00000584418 282 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AL445222.1-201ENST00000607259 628 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AL512329.2-201ENST00000607350 548 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC109347.2-201ENST00000610220 349 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC108479.2-201ENST00000617314 601 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AL139089.1-201ENST00000620372 975 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AL445264.1-201ENST00000621719 171 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 AC008079.2-201ENST00000623543 20396 ntBASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.03□□□□□ -1.6
CCM2LQ9NUG4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 OR11H4-201ENST00000315409 1082 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 UBBP2-201ENST00000376781 231 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RNU6-348P-201ENST00000384386 107 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RNA5SP296-201ENST00000410523 111 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RNU2-66P-201ENST00000410650 161 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RPL31P2-201ENST00000413849 377 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AL513174.1-201ENST00000423182 629 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 OR2AH1P-201ENST00000425717 928 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 OR4F13P-201ENST00000428478 931 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RPL12P17-201ENST00000432393 498 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC005297.1-201ENST00000444765 862 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC004980.3-201ENST00000447046 365 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 NOP56P2-201ENST00000447491 769 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RNA5SP103-201ENST00000459503 118 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RN7SL172P-201ENST00000460535 303 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC100832.1-201ENST00000471945 383 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 RPL7P39-201ENST00000481157 744 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AF131216.2-201ENST00000512316 564 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC016065.2-201ENST00000514530 444 ntBASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.02□□□□□ -1.61
CCM2LQ9NUG4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms