Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC015726.1-201ENST00000602353 681 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM4Q9C037 AC124312.6-202ENST00000623624 418 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 AC091905.1-201ENST00000624400 311 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 MIR3651-201ENST00000630427 90 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 CFTRP2-201ENST00000634304 199 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM4Q9C037 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM4Q9C037 SRP72P2-201ENST00000344851 1979 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM4Q9C037 GABPAP-201ENST00000419271 1356 ntBASIC3.74□□□□□ -1.81
TRIM4Q9C037 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM4Q9C037 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM4Q9C037 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM4Q9C037 SNORA60-201ENST00000362396 134 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM4Q9C037 RNU6-213P-201ENST00000384051 104 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 SNORD3H-201ENST00000384486 214 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC245052.5-201ENST00000416320 649 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC010740.1-201ENST00000417035 684 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC236972.1-201ENST00000433225 199 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 HSPD1P21-201ENST00000436541 245 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 RPS17P13-201ENST00000448974 407 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 MRPS31P2-201ENST00000451581 518 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 RPL38P1-201ENST00000460914 211 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 UBE2DNL-203ENST00000474922 222 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC021146.5-201ENST00000503544 545 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC104619.4-201ENST00000510773 249 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC010265.1-201ENST00000513509 211 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 MIR4738-201ENST00000579134 87 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC009948.4-201ENST00000604692 675 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 AL591424.2-201ENST00000617023 128 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 MIR7975-201ENST00000619350 68 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC009313.2-201ENST00000417893 1941 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM4Q9C037 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM4Q9C037 AC119744.1-201ENST00000454746 1715 ntBASIC3.73□□□□□ -1.81
TRIM4Q9C037 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC021755.1-201ENST00000559747 1447 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 GNG5P1-201ENST00000255500 204 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 RNA5SP105-201ENST00000391123 113 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 HMGB1P13-201ENST00000406019 642 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 HMGB1P37-201ENST00000439613 609 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 CYCSP35-201ENST00000451978 304 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 RPS20P32-201ENST00000456044 356 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC092451.1-201ENST00000480211 153 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 RPS4XP22-201ENST00000480755 780 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC092185.1-201ENST00000491371 97 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 WBP1LP4-201ENST00000505043 344 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 PCBP2P3-201ENST00000509726 843 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 RN7SKP57-201ENST00000517248 293 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 ZNF192P1-203ENST00000565888 810 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 SNX6P1-201ENST00000601728 1224 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC010200.2-201ENST00000605098 235 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM4Q9C037 AL139089.1-201ENST00000620372 975 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 AL079305.1-201ENST00000623159 3008 ntBASIC3.72□□□□□ -1.81
TRIM4Q9C037 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM4Q9C037 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM4Q9C037 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM4Q9C037 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.71□□□□□ -1.81
TRIM4Q9C037 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM4Q9C037 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM4Q9C037 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM4Q9C037 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM4Q9C037 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 SYF2P2-201ENST00000417620 583 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 MTND2P15-201ENST00000418575 892 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 SETP5-201ENST00000437270 562 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM4Q9C037 AC005229.2-201ENST00000456995 399 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 AP002371.1-201ENST00000463604 433 ntBASIC3.71□□□□□ -1.82
TRIM4Q9C037 SNX5P1-201ENST00000505757 1041 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms