Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AP000926.4-201ENST00000527351 454 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC023161.2-201ENST00000551218 780 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC007424.1-203ENST00000554613 687 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 MIR4738-201ENST00000579134 87 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC005000.2-201ENST00000605468 310 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AL355365.1-201ENST00000616480 294 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC145207.9-201ENST00000623802 325 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 MIR3651-201ENST00000630427 90 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 MTCO1P8-201ENST00000416914 1523 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 SAGE2P-201ENST00000420011 2126 ntBASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPAP1Q9BWH6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 OR52E6-202ENST00000379946 954 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC097713.2-201ENST00000430199 356 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC073063.1-201ENST00000434352 607 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 Z99127.2-201ENST00000441426 334 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 RPL21P71-201ENST00000465598 459 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 USP9YP5-201ENST00000511770 630 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC034244.2-201ENST00000514668 858 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 SNORA70.18-201ENST00000516696 98 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 OR4V1P-201ENST00000525394 1140 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 TRAV15-201ENST00000556680 249 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC010591.1-201ENST00000603941 649 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC115621.1-201ENST00000604653 858 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AC069209.1-201ENST00000619282 651 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 U7.8-201ENST00000619968 63 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.35□□□□□ -1.71
RPAP1Q9BWH6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 MIR7-1-201ENST00000384871 110 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AC017079.2-201ENST00000416102 485 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AC005229.2-201ENST00000456995 399 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AC021205.1-201ENST00000468797 348 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 RPS3AP50-201ENST00000487064 803 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AC068305.1-201ENST00000497406 726 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 PCNAP1-201ENST00000505363 709 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 IGHV3-32-201ENST00000519182 355 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AC022784.5-201ENST00000522241 437 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 OR6R2P-201ENST00000609216 300 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 RPL23AP61-201ENST00000623642 466 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 AL732372.2-225ENST00000642124 456 ntBASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPAP1Q9BWH6 SPATA2P1-201ENST00000431223 2055 ntBASIC4.34□□□□□ -1.72
RPAP1Q9BWH6 MFSD8-233ENST00000641482 4860 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 RNU6-1279P-201ENST00000383917 103 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 RNU6-152P-201ENST00000384037 107 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 GSTA12P-201ENST00000402398 508 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 NCSTNP1-201ENST00000406229 144 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AC009302.1-201ENST00000417147 390 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 DBIP2-201ENST00000419076 262 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AC007563.3-201ENST00000433233 371 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AC005019.1-201ENST00000436455 431 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 MRPS31P2-201ENST00000451581 518 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 RNU6-491P-201ENST00000516099 110 ntBASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.33□□□□□ -1.72
RPAP1Q9BWH6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms