Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC007529.1-201ENST00000418574 2178 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 RNU6-468P-201ENST00000384003 109 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL022722.2-201ENST00000402519 180 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 MIR1183-201ENST00000408856 89 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 RPL30P2-201ENST00000414021 291 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 GXYLT1P1-201ENST00000446657 490 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 DNAJC19P8-201ENST00000452887 259 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 MTND6P6-201ENST00000478031 263 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 RPS3AP50-201ENST00000487064 803 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC023050.1-201ENST00000498198 304 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC093801.2-201ENST00000503966 1050 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 C1GALT1P3-201ENST00000522049 819 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 COX6B1P6-201ENST00000522347 255 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AP003102.1-201ENST00000525638 661 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC139103.1-201ENST00000534696 1030 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 CR383656.6-201ENST00000550518 394 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 CBX3P5-201ENST00000552017 521 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 CYP2C60P-201ENST00000566088 139 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC095057.3-201ENST00000567102 1157 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC009101.1-201ENST00000568135 242 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 MIR4738-201ENST00000579134 87 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL136370.1-201ENST00000608166 691 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC005962.2-201ENST00000611427 652 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC106858.1-201ENST00000637497 429 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 NSRP1P1-201ENST00000444067 1693 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC008725.1-201ENST00000605123 2263 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AL592494.2-201ENST00000425455 1548 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 CEP170P1-201ENST00000502249 4587 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 FAM91A3P-201ENST00000456826 2544 ntBASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HDHD3Q9BSH5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 ASNSP1-204ENST00000641977 1664 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 U1.1-201ENST00000384101 164 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 RNU6-1257P-201ENST00000384625 110 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AP002784.2-201ENST00000397300 549 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 MTND2P15-201ENST00000418575 892 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 TCEA1P2-201ENST00000420496 906 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 RPL30P3-201ENST00000424262 333 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 HSFY3P-201ENST00000444242 1191 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AL050341.1-201ENST00000447743 313 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC010618.1-201ENST00000469924 477 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 RPL7P19-201ENST00000469948 618 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC126121.1-201ENST00000482313 553 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC073522.1-201ENST00000483312 377 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 SCARNA14-201ENST00000516903 136 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 RN7SKP283-201ENST00000517197 270 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 OR4A2P-201ENST00000527276 913 ntBASIC3.12□□□□□ -1.91
HDHD3Q9BSH5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms