Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU6-730P-201ENST00000383954 104 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 MIR649-201ENST00000384843 97 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 ARF4P3-201ENST00000397387 509 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL353777.1-201ENST00000425552 326 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC113412.1-201ENST00000425840 504 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL035410.1-201ENST00000427409 427 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 SEPT14P3-201ENST00000439401 183 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL391987.1-201ENST00000441025 200 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL450996.1-201ENST00000445574 1202 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL732372.2-207ENST00000445840 183 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL136380.1-201ENST00000447970 162 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC022431.1-201ENST00000450941 438 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 SEPT14P2-201ENST00000453405 183 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC104563.1-201ENST00000476147 376 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 RN7SL717P-201ENST00000478343 297 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AP001025.2-201ENST00000490908 477 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC010486.1-201ENST00000511793 424 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 SEPT14P4-201ENST00000513445 186 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 FO082796.1-201ENST00000523795 183 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC027544.3-201ENST00000535082 757 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC022404.1-201ENST00000555320 273 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 MIR4795-201ENST00000584182 89 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC011712.1-201ENST00000588959 234 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 FO393422.1-201ENST00000603908 708 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 OR10AB1P-201ENST00000609613 938 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 RMST_3.1-201ENST00000611651 109 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 OR2L1P-202ENST00000641567 1023 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AL360270.2-201ENST00000562952 5985 ntBASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCHD1Q96NR3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC092070.2-203ENST00000598377 3644 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RNU6-451P-201ENST00000362921 107 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RNU6-343P-201ENST00000364709 104 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RN7SKP269-201ENST00000365545 319 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RNU6-744P-201ENST00000365557 107 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RNU6-767P-201ENST00000384132 107 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 RNU6-1316P-201ENST00000384242 108 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC092642.1-201ENST00000392417 425 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 FAT1P1-201ENST00000406588 507 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 BMS1P17-202ENST00000416720 316 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 MTATP6P18-201ENST00000417994 673 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 GAPDHP14-201ENST00000450472 937 ntBASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCHD1Q96NR3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms