Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RPL32P3-201ENST00000359025 275 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-1287P-201ENST00000362914 107 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 SNORA70.5-201ENST00000365519 135 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 Y_RNA.401-201ENST00000383965 117 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-1060P-201ENST00000384664 107 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 Y_RNA.576-201ENST00000384781 102 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-754P-201ENST00000391166 107 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 UBE2V1P2-201ENST00000397758 440 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-516P-201ENST00000411381 104 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC007568.1-201ENST00000422912 471 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC108059.2-201ENST00000434626 151 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 ARL2BPP10-201ENST00000446487 531 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 MTND1P17-201ENST00000448961 204 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RPLP0P1-201ENST00000457002 361 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AL135752.1-201ENST00000479477 471 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RN7SL741P-201ENST00000482473 289 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 OR9A1P-202ENST00000484361 945 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RPS27P20-201ENST00000492051 246 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RPL10P7-201ENST00000495649 625 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-976P-201ENST00000516086 111 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-273P-201ENST00000516937 96 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC100870.1-201ENST00000522035 505 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 HMGN1P26-201ENST00000558737 303 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 MIR3672-201ENST00000584290 82 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC104662.1-201ENST00000604448 511 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AL451044.1-201ENST00000604867 238 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AL008723.3-201ENST00000608926 449 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AL157817.1-201ENST00000614264 790 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC103705.1-201ENST00000619013 241 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC091925.2-201ENST00000625059 256 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC006453.3-201ENST00000635891 377 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC007603.3-201ENST00000636915 979 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 OR52H1-202ENST00000641796 1061 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 API5P2-201ENST00000397055 1498 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AC011416.1-201ENST00000514947 1732 ntBASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC083837.1-201ENST00000565297 2994 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC068769.1-201ENST00000474767 2426 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC020633.1-201ENST00000468439 2247 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RBPJP6-201ENST00000411556 1431 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AL359922.3-201ENST00000624779 1670 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-1309P-201ENST00000363305 108 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-1284P-201ENST00000363701 100 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-432P-201ENST00000384196 109 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 ENSAP1-201ENST00000392855 326 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RN7SKP221-201ENST00000410420 301 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RNA5SP251-201ENST00000410614 137 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RPS15AP40-201ENST00000419621 391 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 TXNP1-201ENST00000441872 371 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 DBIL5P2-201ENST00000443827 253 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 snoU109.4-201ENST00000458953 143 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RN7SL267P-201ENST00000485107 261 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RN7SL868P-201ENST00000485915 303 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RPS27P27-201ENST00000498779 255 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 AC104806.1-201ENST00000508720 308 ntBASIC6.18□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-27P-201ENST00000516146 107 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms