Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 IGKV2D-23-201ENST00000518179 286 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AP001636.2-201ENST00000525517 696 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 OR5M7P-201ENST00000526140 972 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC087763.1-201ENST00000603391 286 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC020910.2-201ENST00000603635 610 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AL163642.2-201ENST00000604722 1019 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AP002360.3-201ENST00000607673 710 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 VIS1.1-201ENST00000610517 203 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AL138721.1-201ENST00000616756 179 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC073342.3-201ENST00000624211 193 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC092184.1-201ENST00000625042 715 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AL445984.1-201ENST00000637834 659 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 LINC01739-205ENST00000641890 573 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 AL672296.1-201ENST00000427780 2158 ntBASIC3.1□□□□□ -1.91
LINC01561Q8N1V8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 LINC02471-203ENST00000641941 4752 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 RNA5SP307-201ENST00000362863 116 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 RNA5SP235-201ENST00000365411 114 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 RNU6-657P-201ENST00000383904 107 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 SNORA40.2-201ENST00000390847 128 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC016769.3-201ENST00000396562 315 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 P2RY10P2-201ENST00000416730 913 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 NANOGP6-201ENST00000429190 847 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC012497.1-201ENST00000429392 575 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 RHOT1P3-201ENST00000436571 331 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 MTND2P20-201ENST00000440805 661 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC010733.1-201ENST00000451515 401 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 USP9YP34-201ENST00000453983 808 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC092757.1-201ENST00000467293 467 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC007686.1-201ENST00000488511 463 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 RPL23AP55-201ENST00000498163 452 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC108941.1-201ENST00000502853 530 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC119751.4-201ENST00000507498 357 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC091868.1-201ENST00000508746 304 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC010625.1-201ENST00000511296 403 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 RN7SKP244-201ENST00000516513 307 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AP000619.3-201ENST00000535634 1127 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 HIGD1AP17-201ENST00000554576 276 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC006116.3-201ENST00000592968 361 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 BPIFA4P-203ENST00000603168 689 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AL139022.2-201ENST00000606934 443 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC080013.4-201ENST00000607624 649 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AL121895.2-201ENST00000619558 447 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC084824.4-201ENST00000620106 731 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC073348.1-201ENST00000623002 331 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC040168.1-201ENST00000623594 991 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC112694.2-201ENST00000623697 768 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC099654.8-201ENST00000637757 681 ntBASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LINC01561Q8N1V8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms