Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 OR5T3-201ENST00000303059 1023 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AL391417.1-201ENST00000404100 426 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AL589655.1-201ENST00000405398 482 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC245054.1-201ENST00000420944 258 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC009965.2-201ENST00000425328 970 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC006989.1-201ENST00000427212 131 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 MTCYBP31-201ENST00000438855 1122 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 XKRY2-201ENST00000442362 1093 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 MTND2P3-201ENST00000452458 470 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC007688.1-201ENST00000475592 759 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC090543.1-201ENST00000492168 485 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC007991.1-201ENST00000522680 631 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC022884.3-201ENST00000579571 248 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC092628.2-201ENST00000622492 339 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC007342.8-201ENST00000623278 678 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 MIR4278-201ENST00000636094 69 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC091152.2-201ENST00000591628 2569 ntBASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC65Q8IXS2 AC026951.1-201ENST00000559530 2459 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AC138915.3-201ENST00000562908 1389 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 U8.11-201ENST00000384699 133 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 U8.12-201ENST00000384701 133 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AL590704.1-201ENST00000402856 794 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 HMGB1P13-201ENST00000406019 642 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 NPM1P24-201ENST00000428039 894 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 MRPS18BP2-201ENST00000434310 759 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 U8.18-201ENST00000459285 133 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 RNU2-58P-201ENST00000516403 183 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AL121576.1-201ENST00000556055 276 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 KATNBL1P1-201ENST00000605192 748 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AL391497.1-201ENST00000608671 547 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 CR589904.2-201ENST00000612533 440 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AC011472.4-201ENST00000615848 491 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 DDX6P1-205ENST00000441966 1436 ntBASIC4.03□□□□□ -1.76
CCDC65Q8IXS2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.77
CCDC65Q8IXS2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 DCAF13P1-201ENST00000495256 1330 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 RNU6-283P-201ENST00000364788 107 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC010385.1-201ENST00000412374 256 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 PRELID3BP11-201ENST00000414230 479 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 MTND4P11-201ENST00000417020 1058 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AIMP1P1-201ENST00000418670 937 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC006511.1-201ENST00000470614 315 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC107398.1-201ENST00000486904 505 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC078817.1-201ENST00000492623 435 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AL035404.1-201ENST00000497982 568 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 MTCO1P31-201ENST00000506355 492 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 HMGN1P11-201ENST00000508668 303 ntBASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC65Q8IXS2 MTND4LP31-201ENST00000514859 294 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms