Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 LINC01355-201ENST00000566551 5444 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP41Q3LFD5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP41Q3LFD5 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 RNA5SP513-201ENST00000364648 118 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 MIR16-1-201ENST00000385271 89 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 GSTA8P-201ENST00000404253 637 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 RNU2-65P-201ENST00000410162 185 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 OR8G2P-201ENST00000412796 908 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 Z75741.2-201ENST00000417272 1167 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 XKRYP1-201ENST00000423438 492 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 XKRYP2-201ENST00000432915 492 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 RPS26P40-201ENST00000435209 294 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 RPL23AP46-201ENST00000438548 490 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC004865.1-201ENST00000442276 1003 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP41Q3LFD5 CCDC75P1-201ENST00000469247 791 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC021146.5-201ENST00000503544 545 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC098862.1-201ENST00000504991 413 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC090151.1-201ENST00000520784 730 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 MED28P5-201ENST00000528254 438 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC034105.4-201ENST00000568304 277 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC113368.1-201ENST00000603736 382 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AL158163.2-201ENST00000619110 700 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC087821.2-201ENST00000637086 450 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP41Q3LFD5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
USP41Q3LFD5 USP9YP4-201ENST00000424401 1745 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 AC022031.1-201ENST00000585985 2593 ntBASIC4.52□□□□□ -1.69
USP41Q3LFD5 MAPK10-253ENST00000641010 4072 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 SEPT7P7-201ENST00000420492 1301 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 MAPK10-304ENST00000641341 3984 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP41Q3LFD5 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 RNU1-85P-201ENST00000364127 164 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 RNU6-272P-201ENST00000411028 104 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 RNA5SP39-201ENST00000411245 120 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 OR51A3P-201ENST00000413596 924 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 RPF2P1-201ENST00000424137 906 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 RPL12P46-201ENST00000436610 195 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC104306.1-201ENST00000449702 371 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 RNA5SP246-201ENST00000458909 119 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 RPL23AP44-201ENST00000482216 473 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 RPS27P23-201ENST00000487608 251 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 RPL21P129-201ENST00000491732 478 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC084024.2-201ENST00000503480 791 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 IGLV3-26-201ENST00000520756 302 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC006064.5-201ENST00000541782 248 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC079395.3-201ENST00000615161 484 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 AC008013.2-202ENST00000637965 364 ntBASIC4.51□□□□□ -1.69
USP41Q3LFD5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP41Q3LFD5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
USP41Q3LFD5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms