Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
RFX4Q33E94 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.45□□□□□ -1.86
RFX4Q33E94 AC011374.2-201ENST00000607135 526 ntBASIC3.45□□□□□ -1.86
RFX4Q33E94 AL023583.1-201ENST00000607518 1143 ntBASIC3.45□□□□□ -1.86
RFX4Q33E94 AC092653.1-201ENST00000608509 531 ntBASIC3.45□□□□□ -1.86
RFX4Q33E94 MIR6716-201ENST00000613413 80 ntBASIC3.45□□□□□ -1.86
RFX4Q33E94 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.45□□□□□ -1.86
RFX4Q33E94 AC073530.2-201ENST00000623987 261 ntBASIC3.45□□□□□ -1.86
RFX4Q33E94 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.45□□□□□ -1.86
RFX4Q33E94 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RFX4Q33E94 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
RFX4Q33E94 AC024341.1-201ENST00000526444 1552 ntBASIC3.45□□□□□ -1.86
RFX4Q33E94 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RFX4Q33E94 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.45□□□□□ -1.86
RFX4Q33E94 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RFX4Q33E94 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
RFX4Q33E94 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
RFX4Q33E94 RNA5SP97-201ENST00000365006 84 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 RNA5SP235-201ENST00000365411 114 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 RNU6-317P-201ENST00000384031 107 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 RNU6-98P-201ENST00000384173 107 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 RNU4-31P-201ENST00000384211 141 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RFX4Q33E94 RNU6-796P-201ENST00000391086 107 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.44□□□□□ -1.86
RFX4Q33E94 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.44□□□□□ -1.86
RFX4Q33E94 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.44□□□□□ -1.86
RFX4Q33E94 ELOCP6-201ENST00000429066 328 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.44□□□□□ -1.86
RFX4Q33E94 ARL4AP4-201ENST00000434170 518 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.44□□□□□ -1.86
RFX4Q33E94 AL138799.3-201ENST00000438968 350 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 ELOCP3-201ENST00000439303 348 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.44□□□□□ -1.86
RFX4Q33E94 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.44□□□□□ -1.86
RFX4Q33E94 MRPS31P2-201ENST00000451581 518 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.44□□□□□ -1.86
RFX4Q33E94 ELOCP12-201ENST00000458706 328 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AC010401.1-201ENST00000463867 348 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AP000893.1-201ENST00000474462 794 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.44□□□□□ -1.86
RFX4Q33E94 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 AC110792.1-201ENST00000491826 472 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AC078817.1-201ENST00000492623 435 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 RPL30P11-201ENST00000495304 339 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 TRAV31-201ENST00000502780 342 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.44□□□□□ -1.86
RFX4Q33E94 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.44□□□□□ -1.86
RFX4Q33E94 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.44□□□□□ -1.86
RFX4Q33E94 RN7SKP82-201ENST00000516786 223 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 SNORA76.2-201ENST00000517095 137 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.44□□□□□ -1.86
RFX4Q33E94 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 AP002812.4-201ENST00000532139 286 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.44□□□□□ -1.86
RFX4Q33E94 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.44□□□□□ -1.86
RFX4Q33E94 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.44□□□□□ -1.86
RFX4Q33E94 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 AC007687.1-201ENST00000602704 304 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AL592436.1-201ENST00000605135 558 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
RFX4Q33E94 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.44□□□□□ -1.86
RFX4Q33E94 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RFX4Q33E94 AL353743.4-201ENST00000422653 1547 ntBASIC3.44□□□□□ -1.86
RFX4Q33E94 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.43□□□□□ -1.86
RFX4Q33E94 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 RLIMP1-201ENST00000339626 1680 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 RNU1-75P-201ENST00000347264 129 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 RNA5SP167-201ENST00000365461 116 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RFX4Q33E94 MTHFD2P2-201ENST00000407725 247 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 AL356095.1-201ENST00000417217 199 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.43□□□□□ -1.86
RFX4Q33E94 AC023128.2-201ENST00000420880 1223 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.43□□□□□ -1.86
RFX4Q33E94 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 Z74696.2-201ENST00000436514 498 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 RNFT1P2-201ENST00000443064 757 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 MTND2P8-201ENST00000450555 1025 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.43□□□□□ -1.86
RFX4Q33E94 HMGB3P30-201ENST00000457863 606 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.43□□□□□ -1.86
RFX4Q33E94 RPS4XP22-201ENST00000480755 780 ntBASIC3.43□□□□□ -1.86
RFX4Q33E94 FCF1P3-201ENST00000496394 590 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms