Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 HMGB1P12-201ENST00000438594 598 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AL645931.1-201ENST00000439737 410 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM6P62312 RPL37P6-202ENST00000464216 403 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.2□□□□□ -1.9
LSM6P62312 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM6P62312 NPM1P41-201ENST00000512920 831 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AC026402.1-201ENST00000513642 170 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AC034244.2-201ENST00000514668 858 ntBASIC3.2□□□□□ -1.9
LSM6P62312 RN7SKP21-201ENST00000516503 220 ntBASIC3.2□□□□□ -1.9
LSM6P62312 RANP9-201ENST00000519957 271 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM6P62312 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.2□□□□□ -1.9
LSM6P62312 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM6P62312 MIR3160-1-201ENST00000577972 85 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM6P62312 AC115085.1-201ENST00000588924 229 ntBASIC3.2□□□□□ -1.9
LSM6P62312 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM6P62312 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM6P62312 AL365503.1-201ENST00000605247 905 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AC005156.1-201ENST00000613371 573 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AP005212.4-201ENST00000614206 710 ntBASIC3.2□□□□□ -1.9
LSM6P62312 PLCE1P1-201ENST00000622094 305 ntBASIC3.2□□□□□ -1.9
LSM6P62312 AC068724.3-201ENST00000625906 87 ntBASIC3.2□□□□□ -1.9
LSM6P62312 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM6P62312 AC006042.3-201ENST00000454684 1469 ntBASIC3.2□□□□□ -1.9
LSM6P62312 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LSM6P62312 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM6P62312 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM6P62312 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LSM6P62312 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM6P62312 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LSM6P62312 ZNF542P-204ENST00000482727 1305 ntBASIC3.19□□□□□ -1.9
LSM6P62312 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM6P62312 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM6P62312 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LSM6P62312 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 RNA5SP42-201ENST00000364278 115 ntBASIC3.19□□□□□ -1.9
LSM6P62312 EIF5P1-201ENST00000400019 1231 ntBASIC3.19□□□□□ -1.9
LSM6P62312 U3.39-201ENST00000408569 239 ntBASIC3.19□□□□□ -1.9
LSM6P62312 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM6P62312 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.19□□□□□ -1.9
LSM6P62312 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM6P62312 AC245054.1-201ENST00000420944 258 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM6P62312 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM6P62312 AC002075.2-201ENST00000425207 252 ntBASIC3.19□□□□□ -1.9
LSM6P62312 OR4F13P-201ENST00000428478 931 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AC091390.1-201ENST00000433904 331 ntBASIC3.19□□□□□ -1.9
LSM6P62312 RPL21P112-201ENST00000434403 463 ntBASIC3.19□□□□□ -1.9
LSM6P62312 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM6P62312 RPS29P7-201ENST00000439662 171 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AL157827.1-201ENST00000447622 132 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AC103987.1-201ENST00000473394 348 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AC093267.1-201ENST00000489176 961 ntBASIC3.19□□□□□ -1.9
LSM6P62312 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LSM6P62312 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM6P62312 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.19□□□□□ -1.9
LSM6P62312 RNU2-27P-201ENST00000516185 142 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.19□□□□□ -1.9
LSM6P62312 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM6P62312 AC010735.1-201ENST00000567305 1026 ntBASIC3.19□□□□□ -1.9
LSM6P62312 MIR4697-201ENST00000582977 78 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AC107982.3-201ENST00000584957 985 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AC006077.1-201ENST00000604746 343 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AL392112.1-201ENST00000605115 829 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AC099676.1-201ENST00000608886 657 ntBASIC3.19□□□□□ -1.9
LSM6P62312 MIR6810-201ENST00000622701 70 ntBASIC3.19□□□□□ -1.9
LSM6P62312 AC016717.3-201ENST00000624730 554 ntBASIC3.19□□□□□ -1.9
LSM6P62312 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM6P62312 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LSM6P62312 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM6P62312 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LSM6P62312 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
LSM6P62312 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM6P62312 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LSM6P62312 XKRYP4-201ENST00000414395 483 ntBASIC3.18□□□□□ -1.9
LSM6P62312 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 MTND2P16-201ENST00000419987 799 ntBASIC3.18□□□□□ -1.9
LSM6P62312 SDCBPP2-201ENST00000424643 885 ntBASIC3.18□□□□□ -1.9
LSM6P62312 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.18□□□□□ -1.9
LSM6P62312 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.18□□□□□ -1.9
LSM6P62312 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM6P62312 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.18□□□□□ -1.9
LSM6P62312 XKRYP5-201ENST00000449659 483 ntBASIC3.18□□□□□ -1.9
LSM6P62312 AC023598.1-201ENST00000472521 361 ntBASIC3.18□□□□□ -1.9
LSM6P62312 RPS4XP13-201ENST00000483219 789 ntBASIC3.18□□□□□ -1.9
LSM6P62312 RPS3AP50-201ENST00000487064 803 ntBASIC3.18□□□□□ -1.9
LSM6P62312 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms