Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RPL30P2-201ENST00000414021 291 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 MTND4LP21-201ENST00000415303 295 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 VN1R31P-201ENST00000417498 730 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.49□□□□□ -1.85
AP1S1P61966 AC002075.2-201ENST00000425207 252 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.49□□□□□ -1.85
AP1S1P61966 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
AP1S1P61966 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.49□□□□□ -1.85
AP1S1P61966 AP000873.1-201ENST00000463987 400 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.49□□□□□ -1.85
AP1S1P61966 AP000563.1-201ENST00000490865 758 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 AL035404.1-201ENST00000497982 568 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 Vault.1-201ENST00000516474 102 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 SOD1P3-201ENST00000518682 454 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.49□□□□□ -1.85
AP1S1P61966 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.49□□□□□ -1.85
AP1S1P61966 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.49□□□□□ -1.85
AP1S1P61966 XIST_intron.1-201ENST00000619444 68 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 AC015967.1-201ENST00000619893 476 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
AP1S1P61966 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
AP1S1P61966 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AP1S1P61966 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AP1S1P61966 GABPAP-201ENST00000419271 1356 ntBASIC3.49□□□□□ -1.85
AP1S1P61966 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.49□□□□□ -1.85
AP1S1P61966 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AP1S1P61966 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AP1S1P61966 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
AP1S1P61966 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
AP1S1P61966 SNORA71.3-201ENST00000362582 128 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 RNU6-1331P-201ENST00000363658 106 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 MIR7-3-201ENST00000384898 110 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AL136116.1-201ENST00000403591 381 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S1P61966 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S1P61966 MTCYBP31-201ENST00000438855 1122 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S1P61966 RPL6P5-201ENST00000445678 828 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 RPL23AP67-201ENST00000465341 474 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 RN7SL293P-201ENST00000481765 281 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 SNX5P1-201ENST00000505757 1041 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.48□□□□□ -1.85
AP1S1P61966 FCF1P8-201ENST00000510322 597 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.48□□□□□ -1.85
AP1S1P61966 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
AP1S1P61966 CCNG2P1-201ENST00000549521 1000 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S1P61966 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.48□□□□□ -1.85
AP1S1P61966 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.48□□□□□ -1.85
AP1S1P61966 ABI1P1-201ENST00000603375 1120 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AC019176.2-201ENST00000611579 315 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AL355365.1-201ENST00000616480 294 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AP003072.5-201ENST00000623872 773 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 AL645937.1-201ENST00000641739 1652 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
AP1S1P61966 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
AP1S1P61966 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
AP1S1P61966 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
AP1S1P61966 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.48□□□□□ -1.85
AP1S1P61966 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.48□□□□□ -1.85
AP1S1P61966 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S1P61966 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
AP1S1P61966 PWAR6-201ENST00000552334 4618 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S1P61966 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S1P61966 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S1P61966 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S1P61966 AL389915.1-201ENST00000422463 466 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 AL138799.3-201ENST00000438968 350 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
AP1S1P61966 CYCSP35-201ENST00000451978 304 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S1P61966 AC026784.1-201ENST00000507986 352 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.47□□□□□ -1.85
AP1S1P61966 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
AP1S1P61966 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.47□□□□□ -1.85
AP1S1P61966 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S1P61966 AC106785.3-201ENST00000564064 847 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 CYP2C60P-201ENST00000566088 139 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S1P61966 MIR5186-201ENST00000577504 120 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.47□□□□□ -1.85
AP1S1P61966 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S1P61966 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
AP1S1P61966 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S1P61966 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.47□□□□□ -1.85
AP1S1P61966 AC138915.3-201ENST00000562908 1389 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S1P61966 SPATA2P1-201ENST00000431223 2055 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 AL356274.2-201ENST00000624379 3752 ntBASIC3.47□□□□□ -1.85
AP1S1P61966 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S1P61966 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
AP1S1P61966 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.85
AP1S1P61966 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
AP1S1P61966 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.46□□□□□ -1.85
AP1S1P61966 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms