Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.9□□□□□ -1.63
COPAP53621 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.9□□□□□ -1.63
COPAP53621 TRAV15-201ENST00000556680 249 ntBASIC4.9□□□□□ -1.63
COPAP53621 EIF5A2P1-201ENST00000564027 460 ntBASIC4.9□□□□□ -1.63
COPAP53621 MIR5096-201ENST00000583713 70 ntBASIC4.9□□□□□ -1.63
COPAP53621 MIR4999-201ENST00000585029 91 ntBASIC4.9□□□□□ -1.63
COPAP53621 NBR2-204ENST00000587322 63 ntBASIC4.9□□□□□ -1.63
COPAP53621 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.9□□□□□ -1.63
COPAP53621 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.9□□□□□ -1.63
COPAP53621 AC103881.1-201ENST00000603476 538 ntBASIC4.9□□□□□ -1.63
COPAP53621 AC105129.3-201ENST00000605455 485 ntBASIC4.9□□□□□ -1.63
COPAP53621 FAM27B-201ENST00000610601 213 ntBASIC4.9□□□□□ -1.63
COPAP53621 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
COPAP53621 AL607023.1-201ENST00000620045 248 ntBASIC4.9□□□□□ -1.63
COPAP53621 AC107081.3-201ENST00000612715 2034 ntBASIC4.9□□□□□ -1.63
COPAP53621 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.9□□□□□ -1.63
COPAP53621 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
COPAP53621 PNPT1P2-201ENST00000456768 2050 ntBASIC4.9□□□□□ -1.63
COPAP53621 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
COPAP53621 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.9□□□□□ -1.63
COPAP53621 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.9□□□□□ -1.63
COPAP53621 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
COPAP53621 ELL2P3-201ENST00000457883 1602 ntBASIC4.9□□□□□ -1.63
COPAP53621 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.89□□□□□ -1.63
COPAP53621 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
COPAP53621 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.89□□□□□ -1.63
COPAP53621 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 AC008758.3-201ENST00000507003 1829 ntBASIC4.89□□□□□ -1.63
COPAP53621 AL590240.1-201ENST00000334118 313 ntBASIC4.89□□□□□ -1.63
COPAP53621 Y_RNA.25-201ENST00000362528 102 ntBASIC4.89□□□□□ -1.63
COPAP53621 SNORA73.1-201ENST00000363107 205 ntBASIC4.89□□□□□ -1.63
COPAP53621 RNU6-621P-201ENST00000364752 109 ntBASIC4.89□□□□□ -1.63
COPAP53621 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COPAP53621 DSTNP4-201ENST00000399472 474 ntBASIC4.89□□□□□ -1.63
COPAP53621 FABP12P1-201ENST00000401911 322 ntBASIC4.89□□□□□ -1.63
COPAP53621 AL592291.1-201ENST00000403830 352 ntBASIC4.89□□□□□ -1.63
COPAP53621 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.89□□□□□ -1.63
COPAP53621 SEPT2P1-201ENST00000419651 180 ntBASIC4.89□□□□□ -1.63
COPAP53621 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.89□□□□□ -1.63
COPAP53621 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.89□□□□□ -1.63
COPAP53621 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.89□□□□□ -1.63
COPAP53621 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COPAP53621 NDUFS5P3-201ENST00000450668 321 ntBASIC4.89□□□□□ -1.63
COPAP53621 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.89□□□□□ -1.63
COPAP53621 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.89□□□□□ -1.63
COPAP53621 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.89□□□□□ -1.63
COPAP53621 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
COPAP53621 FTH1P24-201ENST00000503502 462 ntBASIC4.89□□□□□ -1.63
COPAP53621 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.89□□□□□ -1.63
COPAP53621 AC111000.2-201ENST00000507775 550 ntBASIC4.89□□□□□ -1.63
COPAP53621 AC111000.3-201ENST00000508057 576 ntBASIC4.89□□□□□ -1.63
COPAP53621 AC027309.2-201ENST00000520566 192 ntBASIC4.89□□□□□ -1.63
COPAP53621 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.89□□□□□ -1.63
COPAP53621 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.89□□□□□ -1.63
COPAP53621 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.89□□□□□ -1.63
COPAP53621 ISCA1P3-201ENST00000577104 373 ntBASIC4.89□□□□□ -1.63
COPAP53621 AC022726.1-201ENST00000587475 207 ntBASIC4.89□□□□□ -1.63
COPAP53621 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.89□□□□□ -1.63
COPAP53621 AC124312.4-201ENST00000605533 310 ntBASIC4.89□□□□□ -1.63
COPAP53621 AC122133.1-201ENST00000613964 233 ntBASIC4.89□□□□□ -1.63
COPAP53621 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.89□□□□□ -1.63
COPAP53621 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.89□□□□□ -1.63
COPAP53621 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COPAP53621 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.89□□□□□ -1.63
COPAP53621 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPAP53621 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COPAP53621 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.88□□□□□ -1.63
COPAP53621 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COPAP53621 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.88□□□□□ -1.63
COPAP53621 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 RNU6-931P-201ENST00000363850 107 ntBASIC4.88□□□□□ -1.63
COPAP53621 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 SNORD116-9-201ENST00000384000 95 ntBASIC4.88□□□□□ -1.63
COPAP53621 SNORD116-3-201ENST00000384287 95 ntBASIC4.88□□□□□ -1.63
COPAP53621 SNORD116-7-201ENST00000384404 95 ntBASIC4.88□□□□□ -1.63
COPAP53621 SNORD116-5-201ENST00000384462 95 ntBASIC4.88□□□□□ -1.63
COPAP53621 RPS3AP23-201ENST00000401762 784 ntBASIC4.88□□□□□ -1.63
COPAP53621 RN7SKP106-201ENST00000410832 272 ntBASIC4.88□□□□□ -1.63
COPAP53621 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.88□□□□□ -1.63
COPAP53621 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.88□□□□□ -1.63
COPAP53621 RPS12P5-201ENST00000423449 371 ntBASIC4.88□□□□□ -1.63
COPAP53621 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.88□□□□□ -1.63
COPAP53621 RPS25P9-201ENST00000435591 252 ntBASIC4.88□□□□□ -1.63
COPAP53621 AL591503.2-201ENST00000442314 1005 ntBASIC4.88□□□□□ -1.63
COPAP53621 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.88□□□□□ -1.63
COPAP53621 MRPL48P1-201ENST00000445390 636 ntBASIC4.88□□□□□ -1.63
COPAP53621 MTCYBP3-201ENST00000445588 1137 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms