Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HTTP42858 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HTTP42858 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.4□□□□□ -1.87
HTTP42858 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HTTP42858 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HTTP42858 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HTTP42858 AP000873.5-201ENST00000533906 236 ntBASIC3.4□□□□□ -1.87
HTTP42858 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.4□□□□□ -1.87
HTTP42858 AC079600.2-201ENST00000550076 130 ntBASIC3.4□□□□□ -1.87
HTTP42858 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.4□□□□□ -1.87
HTTP42858 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC3.4□□□□□ -1.87
HTTP42858 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HTTP42858 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HTTP42858 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HTTP42858 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.4□□□□□ -1.87
HTTP42858 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HTTP42858 RPS26P47-201ENST00000427219 348 ntBASIC3.39□□□□□ -1.87
HTTP42858 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.39□□□□□ -1.87
HTTP42858 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.39□□□□□ -1.87
HTTP42858 RPS26P3-201ENST00000470205 348 ntBASIC3.39□□□□□ -1.87
HTTP42858 AC004057.1-201ENST00000485827 348 ntBASIC3.39□□□□□ -1.87
HTTP42858 RPL23AP73-201ENST00000492507 471 ntBASIC3.39□□□□□ -1.87
HTTP42858 RFPL4AP3-201ENST00000515267 345 ntBASIC3.39□□□□□ -1.87
HTTP42858 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC3.39□□□□□ -1.87
HTTP42858 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HTTP42858 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HTTP42858 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
HTTP42858 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HTTP42858 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.39□□□□□ -1.87
HTTP42858 EIF4EP1-201ENST00000422311 642 ntBASIC3.39□□□□□ -1.87
HTTP42858 RPL21P40-201ENST00000428586 483 ntBASIC3.39□□□□□ -1.87
HTTP42858 SEPT14P1-201ENST00000458703 648 ntBASIC3.39□□□□□ -1.87
HTTP42858 AC114967.1-201ENST00000504890 259 ntBASIC3.39□□□□□ -1.87
HTTP42858 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HTTP42858 AC106785.3-201ENST00000564064 847 ntBASIC3.39□□□□□ -1.87
HTTP42858 PLCE1P1-201ENST00000622094 305 ntBASIC3.39□□□□□ -1.87
HTTP42858 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HTTP42858 DDX18P4-201ENST00000511690 1966 ntBASIC3.39□□□□□ -1.87
HTTP42858 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HTTP42858 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HTTP42858 Y_RNA.226-201ENST00000364337 114 ntBASIC3.39□□□□□ -1.87
HTTP42858 SNORA3.2-201ENST00000408221 125 ntBASIC3.39□□□□□ -1.87
HTTP42858 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.39□□□□□ -1.87
HTTP42858 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HTTP42858 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.39□□□□□ -1.87
HTTP42858 AC019227.1-201ENST00000526902 510 ntBASIC3.39□□□□□ -1.87
HTTP42858 SULT1C2P2-201ENST00000562517 294 ntBASIC3.39□□□□□ -1.87
HTTP42858 AC007566.2-201ENST00000603642 413 ntBASIC3.39□□□□□ -1.87
HTTP42858 AL356274.1-201ENST00000617064 410 ntBASIC3.39□□□□□ -1.87
HTTP42858 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
HTTP42858 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HTTP42858 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC3.39□□□□□ -1.87
HTTP42858 AC027290.2-201ENST00000623210 18662 ntBASIC3.38□□□□□ -1.87
HTTP42858 MFSD8-233ENST00000641482 4860 ntBASIC3.38□□□□□ -1.87
HTTP42858 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HTTP42858 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HTTP42858 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HTTP42858 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
HTTP42858 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HTTP42858 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HTTP42858 SNORA71.1-201ENST00000364523 117 ntBASIC3.38□□□□□ -1.87
HTTP42858 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.38□□□□□ -1.87
HTTP42858 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.38□□□□□ -1.87
HTTP42858 SKP1P1-201ENST00000438081 489 ntBASIC3.38□□□□□ -1.87
HTTP42858 RPS12P18-201ENST00000442381 270 ntBASIC3.38□□□□□ -1.87
HTTP42858 AP000936.2-201ENST00000447151 681 ntBASIC3.38□□□□□ -1.87
HTTP42858 MORF4L2P1-201ENST00000503761 858 ntBASIC3.38□□□□□ -1.87
HTTP42858 AC007318.2-201ENST00000620999 243 ntBASIC3.38□□□□□ -1.87
HTTP42858 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HTTP42858 AC010168.2-201ENST00000562691 5428 ntBASIC3.38□□□□□ -1.87
HTTP42858 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HTTP42858 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HTTP42858 SNORD15B-201ENST00000384714 146 ntBASIC3.38□□□□□ -1.87
HTTP42858 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC3.38□□□□□ -1.87
HTTP42858 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HTTP42858 AC099506.2-201ENST00000623074 221 ntBASIC3.38□□□□□ -1.87
HTTP42858 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.38□□□□□ -1.87
HTTP42858 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.38□□□□□ -1.87
HTTP42858 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HTTP42858 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.37□□□□□ -1.87
HTTP42858 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.37□□□□□ -1.87
HTTP42858 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.37□□□□□ -1.87
HTTP42858 BNIP3P41-202ENST00000616656 861 ntBASIC3.37□□□□□ -1.87
HTTP42858 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 AC092435.4-201ENST00000623012 4159 ntBASIC3.37□□□□□ -1.87
HTTP42858 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 NCOA4P2-201ENST00000340589 1813 ntBASIC3.37□□□□□ -1.87
HTTP42858 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HTTP42858 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HTTP42858 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HTTP42858 RPL7P8-201ENST00000411964 730 ntBASIC3.37□□□□□ -1.87
HTTP42858 AL445528.1-201ENST00000426330 420 ntBASIC3.37□□□□□ -1.87
HTTP42858 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.37□□□□□ -1.87
HTTP42858 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
HTTP42858 OR5AP1P-201ENST00000529730 940 ntBASIC3.37□□□□□ -1.87
HTTP42858 AC027176.1-201ENST00000560204 514 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms