Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC245517.2-201ENST00000442890 346 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 RPS3AP12-201ENST00000443616 753 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 CYCSP35-201ENST00000451978 304 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 AL133477.1-201ENST00000457472 514 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.78□□□□□ -1.8
TNFSF9P41273 RPS4XP10-201ENST00000465034 731 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 RWDD4P1-201ENST00000488019 565 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 RPL23AP73-201ENST00000492507 471 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 SETP14-201ENST00000497538 873 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
TNFSF9P41273 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.78□□□□□ -1.8
TNFSF9P41273 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.78□□□□□ -1.8
TNFSF9P41273 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TNFSF9P41273 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.78□□□□□ -1.8
TNFSF9P41273 AC026333.2-201ENST00000542164 106 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.78□□□□□ -1.8
TNFSF9P41273 MIMT1-201ENST00000597105 1050 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.78□□□□□ -1.8
TNFSF9P41273 MIR7851-201ENST00000610611 160 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 AC009452.1-201ENST00000640823 606 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TNFSF9P41273 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TNFSF9P41273 AC068647.1-201ENST00000489539 2265 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.81
TNFSF9P41273 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.81
TNFSF9P41273 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.77□□□□□ -1.81
TNFSF9P41273 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
TNFSF9P41273 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
TNFSF9P41273 PRO1804-201ENST00000623780 2050 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
TNFSF9P41273 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.77□□□□□ -1.81
TNFSF9P41273 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.77□□□□□ -1.81
TNFSF9P41273 RNU6-525P-201ENST00000363685 104 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 RNA5SP72-201ENST00000364442 117 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 SNORA62.2-201ENST00000364672 152 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.77□□□□□ -1.81
TNFSF9P41273 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFSF9P41273 HMGB1P16-201ENST00000447155 540 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 HMGB1P26-201ENST00000452520 628 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 MTCO3P20-201ENST00000454926 688 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.77□□□□□ -1.81
TNFSF9P41273 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.77□□□□□ -1.81
TNFSF9P41273 AC023050.1-201ENST00000498198 304 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 OR52A4P-203ENST00000498233 1014 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.77□□□□□ -1.81
TNFSF9P41273 IGKV2-26-201ENST00000518305 343 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 DUXAP6-201ENST00000553858 601 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.77□□□□□ -1.81
TNFSF9P41273 AC005412.1-201ENST00000580812 1049 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 NF1P5-201ENST00000588287 448 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TNFSF9P41273 AC020914.4-201ENST00000597690 277 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 ELOCP35-201ENST00000604289 336 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TNFSF9P41273 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFSF9P41273 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TNFSF9P41273 MAPK10-373ENST00000641983 6772 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFSF9P41273 AL118496.1-201ENST00000440201 1812 ntBASIC3.77□□□□□ -1.81
TNFSF9P41273 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TNFSF9P41273 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFSF9P41273 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TNFSF9P41273 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TNFSF9P41273 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFSF9P41273 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFSF9P41273 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFSF9P41273 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TNFSF9P41273 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFSF9P41273 RNA5SP50-201ENST00000363731 107 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFSF9P41273 BX323014.1-201ENST00000412876 237 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 HSFY4P-201ENST00000415994 1181 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFSF9P41273 RPL30P3-201ENST00000424262 333 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFSF9P41273 RPS15AP29-201ENST00000445539 400 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 AC007967.1-201ENST00000455422 1159 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 AC023598.1-201ENST00000472521 361 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.76□□□□□ -1.81
TNFSF9P41273 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFSF9P41273 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFSF9P41273 RNU2-27P-201ENST00000516185 142 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 SNORA70.24-201ENST00000517233 118 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFSF9P41273 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFSF9P41273 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFSF9P41273 MIR5186-201ENST00000577504 120 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFSF9P41273 AC006946.3-201ENST00000609791 756 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 AC022149.2-201ENST00000621061 203 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 CR392039.4-201ENST00000624968 501 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.76□□□□□ -1.81
TNFSF9P41273 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFSF9P41273 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFSF9P41273 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFSF9P41273 AL353743.4-201ENST00000422653 1547 ntBASIC3.75□□□□□ -1.81
TNFSF9P41273 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFSF9P41273 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFSF9P41273 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms