Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.92□□□□□ -1.78
CASQ1P31415 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.92□□□□□ -1.78
CASQ1P31415 OR9M1P-201ENST00000459641 921 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 HIGD1AP3-201ENST00000515857 278 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.92□□□□□ -1.78
CASQ1P31415 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.92□□□□□ -1.78
CASQ1P31415 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CASQ1P31415 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
CASQ1P31415 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.92□□□□□ -1.78
CASQ1P31415 AC023158.1-201ENST00000561632 1025 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 AC005951.1-201ENST00000576706 485 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 AP005901.4-201ENST00000577336 569 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.92□□□□□ -1.78
CASQ1P31415 AL109653.1-201ENST00000603091 248 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 U73479.1-201ENST00000618062 168 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CASQ1P31415 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.92□□□□□ -1.78
CASQ1P31415 CIR1P2-201ENST00000514821 1342 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 AC004925.1-201ENST00000624256 2706 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.92□□□□□ -1.78
CASQ1P31415 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CASQ1P31415 AC005261.4-201ENST00000600047 1385 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.91□□□□□ -1.78
CASQ1P31415 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CASQ1P31415 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.91□□□□□ -1.78
CASQ1P31415 AC068647.1-201ENST00000489539 2265 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CASQ1P31415 RNA5SP509-201ENST00000364577 119 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 RNA5SP505-201ENST00000364748 108 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 SNORA73.2-201ENST00000364946 201 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 ELOCP19-201ENST00000411919 318 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.91□□□□□ -1.78
CASQ1P31415 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 DNAJC19P7-201ENST00000428811 344 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 MRPL50P1-201ENST00000431951 384 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.91□□□□□ -1.78
CASQ1P31415 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CASQ1P31415 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.91□□□□□ -1.78
CASQ1P31415 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.91□□□□□ -1.78
CASQ1P31415 AC125238.1-201ENST00000448842 249 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 UQCRHP4-201ENST00000471686 272 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 AC084357.1-201ENST00000473404 255 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.91□□□□□ -1.78
CASQ1P31415 MTND3P6-201ENST00000485242 339 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 MTCO3P35-201ENST00000485582 781 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 AC091167.1-201ENST00000492017 396 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 AC025674.1-201ENST00000507074 324 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.91□□□□□ -1.78
CASQ1P31415 RNA5SP164-201ENST00000516533 110 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 RNU6-1073P-201ENST00000517182 106 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 RNA5SP380-201ENST00000517190 98 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 AP001207.1-201ENST00000524051 481 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.91□□□□□ -1.78
CASQ1P31415 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.91□□□□□ -1.78
CASQ1P31415 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.91□□□□□ -1.78
CASQ1P31415 RN7SL600P-201ENST00000581811 299 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.91□□□□□ -1.78
CASQ1P31415 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.91□□□□□ -1.78
CASQ1P31415 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.91□□□□□ -1.78
CASQ1P31415 IPO5P1-202ENST00000600039 287 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 AC114781.5-201ENST00000615297 108 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 MIR7703-201ENST00000620784 77 ntBASIC3.91□□□□□ -1.78
CASQ1P31415 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CASQ1P31415 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.91□□□□□ -1.78
CASQ1P31415 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CASQ1P31415 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CASQ1P31415 AC007656.2-201ENST00000624902 4547 ntBASIC3.9□□□□□ -1.78
CASQ1P31415 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CASQ1P31415 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CASQ1P31415 RNU1-75P-201ENST00000347264 129 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CASQ1P31415 RNU6-1293P-201ENST00000384077 107 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CASQ1P31415 HMGB3P23-201ENST00000414981 585 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 AC012498.1-201ENST00000424037 437 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.9□□□□□ -1.79
CASQ1P31415 DPPA2P1-201ENST00000428060 556 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.9□□□□□ -1.79
CASQ1P31415 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CASQ1P31415 RPS15AP1-201ENST00000457423 391 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 RPL21P8-201ENST00000465083 535 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 AC006483.1-201ENST00000487308 313 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 AC111193.1-201ENST00000504097 155 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CASQ1P31415 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.9□□□□□ -1.79
CASQ1P31415 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.9□□□□□ -1.79
CASQ1P31415 AC108064.1-201ENST00000513791 460 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.9□□□□□ -1.79
CASQ1P31415 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.9□□□□□ -1.79
CASQ1P31415 AP006245.1-201ENST00000522549 120 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 AC104115.2-201ENST00000523026 687 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.9□□□□□ -1.79
CASQ1P31415 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.9□□□□□ -1.79
CASQ1P31415 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CASQ1P31415 RNU6-156P-201ENST00000621869 107 ntBASIC3.9□□□□□ -1.79
CASQ1P31415 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.9□□□□□ -1.79
CASQ1P31415 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CASQ1P31415 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
CASQ1P31415 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CASQ1P31415 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms