Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.33□□□□□ -1.88
CD40LGP29965 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CD40LGP29965 AC092326.2-201ENST00000624772 1561 ntBASIC3.33□□□□□ -1.88
CD40LGP29965 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
CD40LGP29965 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CD40LGP29965 AC011978.2-201ENST00000569835 2054 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CD40LGP29965 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CD40LGP29965 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
CD40LGP29965 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.32□□□□□ -1.88
CD40LGP29965 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CD40LGP29965 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD40LGP29965 RNA5SP399-201ENST00000364003 117 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 RNA5SP235-201ENST00000365411 114 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 SNORA62-201ENST00000365493 153 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CD40LGP29965 OR6C69P-201ENST00000394268 893 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.32□□□□□ -1.88
CD40LGP29965 LINC01881-201ENST00000416103 412 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 AC245291.1-201ENST00000419501 328 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.32□□□□□ -1.88
CD40LGP29965 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.32□□□□□ -1.88
CD40LGP29965 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.32□□□□□ -1.88
CD40LGP29965 TPTE2P6-202ENST00000445572 1007 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 NF1P3-201ENST00000457709 450 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 HMGB3P14-201ENST00000494195 599 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 SNORA31.9-201ENST00000516429 84 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 RNA5SP49-201ENST00000516450 115 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.32□□□□□ -1.88
CD40LGP29965 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.32□□□□□ -1.88
CD40LGP29965 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.32□□□□□ -1.88
CD40LGP29965 ARF4P1-201ENST00000605447 541 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 MIR6748-201ENST00000610433 71 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 AC114781.5-201ENST00000615297 108 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 MIR7703-201ENST00000620784 77 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 MIR3653-201ENST00000625572 110 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.32□□□□□ -1.88
CD40LGP29965 CDRT1-208ENST00000630868 794 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CD40LGP29965 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CD40LGP29965 GTF2H2B-203ENST00000508065 1432 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
CD40LGP29965 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CD40LGP29965 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CD40LGP29965 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CD40LGP29965 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD40LGP29965 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CD40LGP29965 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.31□□□□□ -1.88
CD40LGP29965 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD40LGP29965 RNU4-39P-201ENST00000362455 127 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.31□□□□□ -1.88
CD40LGP29965 U3.22-201ENST00000391120 215 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AL583834.1-201ENST00000406943 343 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 RNA5SP107-201ENST00000411358 122 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AC126124.2-201ENST00000413542 321 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AL807761.1-201ENST00000417622 171 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 COX6CP17-201ENST00000421389 185 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.31□□□□□ -1.88
CD40LGP29965 AL592293.2-201ENST00000422292 996 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 BX890604.2-201ENST00000427883 474 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AP000907.1-201ENST00000428428 510 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 MRPL50P1-201ENST00000431951 384 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 VDAC1P3-201ENST00000434069 851 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AC074367.1-201ENST00000438685 1125 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AL513343.1-201ENST00000451818 792 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 RPL38P1-201ENST00000460914 211 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 RPL21P104-201ENST00000464143 478 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 RPS23P7-201ENST00000466210 444 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 RPS27AP1-201ENST00000475545 471 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AC012181.1-201ENST00000479895 423 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AC105137.1-201ENST00000484355 562 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 RN7SL691P-201ENST00000494487 301 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 RPL23AP55-201ENST00000498163 452 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 ATG10-AS1-201ENST00000504846 648 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.31□□□□□ -1.88
CD40LGP29965 HPRT1P1-201ENST00000509498 657 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AC008958.1-201ENST00000511047 682 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40LGP29965 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40LGP29965 HIGD1AP5-201ENST00000529959 259 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.31□□□□□ -1.88
CD40LGP29965 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40LGP29965 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.31□□□□□ -1.88
CD40LGP29965 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.31□□□□□ -1.88
CD40LGP29965 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40LGP29965 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40LGP29965 MIR7151-201ENST00000617477 60 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40LGP29965 AC011944.2-201ENST00000624440 683 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40LGP29965 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CD40LGP29965 AC007256.1-201ENST00000392253 2765 ntBASIC3.31□□□□□ -1.88
CD40LGP29965 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40LGP29965 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD40LGP29965 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40LGP29965 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40LGP29965 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CD40LGP29965 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms