Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMARCA1P28370 RN7SKP216-201ENST00000411050 312 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 VDAC1P9-201ENST00000412766 841 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AL450992.3-201ENST00000413192 568 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.26□□□□□ -1.57
SMARCA1P28370 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.26□□□□□ -1.57
SMARCA1P28370 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.26□□□□□ -1.57
SMARCA1P28370 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.26□□□□□ -1.57
SMARCA1P28370 RPL21P91-201ENST00000429231 479 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AL050321.1-201ENST00000432363 400 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.26□□□□□ -1.57
SMARCA1P28370 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.26□□□□□ -1.57
SMARCA1P28370 AL357520.1-201ENST00000441557 453 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 RPL23AP43-201ENST00000446445 471 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 MTCO2P7-201ENST00000446518 666 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AL445669.2-201ENST00000454425 421 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 MTND1P16-201ENST00000465177 898 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC104689.1-201ENST00000473356 768 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC022795.1-201ENST00000473808 480 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 NCOR1P1-202ENST00000486162 291 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC112198.1-201ENST00000505369 1220 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.26□□□□□ -1.57
SMARCA1P28370 AC008885.2-201ENST00000509506 930 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.26□□□□□ -1.57
SMARCA1P28370 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.26□□□□□ -1.57
SMARCA1P28370 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.26□□□□□ -1.57
SMARCA1P28370 AC090312.1-201ENST00000580637 348 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 MIR5096-201ENST00000583713 70 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AL590229.1-201ENST00000603497 542 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC093765.1-201ENST00000603758 881 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 DUXAP11-201ENST00000603858 526 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SMARCA1P28370 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 AF246928.1-201ENST00000623768 87 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 BMS1P21-201ENST00000634565 365 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 FP325313.1-201ENST00000638228 703 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.26□□□□□ -1.57
SMARCA1P28370 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMARCA1P28370 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SMARCA1P28370 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMARCA1P28370 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.26□□□□□ -1.57
SMARCA1P28370 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.26□□□□□ -1.57
SMARCA1P28370 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMARCA1P28370 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMARCA1P28370 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.25□□□□□ -1.57
SMARCA1P28370 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SMARCA1P28370 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.25□□□□□ -1.57
SMARCA1P28370 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SMARCA1P28370 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC011155.1-201ENST00000316512 456 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 RNU6-1066P-201ENST00000363573 105 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 Y_RNA.560-201ENST00000384689 102 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 MIR659-201ENST00000384963 97 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 GLULP6-201ENST00000399502 913 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AL139098.1-201ENST00000407291 389 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 RPL23AP47-201ENST00000408017 460 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC069213.2-201ENST00000420238 366 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AL022400.1-201ENST00000423946 935 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AL035407.1-201ENST00000429211 571 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AL589823.1-201ENST00000429577 183 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 RPL23AP93-201ENST00000440847 484 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 RPS27AP15-201ENST00000447672 466 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.25□□□□□ -1.57
SMARCA1P28370 APOOP2-201ENST00000461561 539 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 RPL30P6-201ENST00000475925 342 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC080014.1-201ENST00000496877 1201 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC005178.1-201ENST00000508392 440 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA1P28370 MTCYBP28-201ENST00000566728 1132 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC011260.1-201ENST00000578420 472 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 MIR4716-201ENST00000579628 84 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AC018714.1-201ENST00000605028 208 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.25□□□□□ -1.57
SMARCA1P28370 AC090948.2-201ENST00000607363 564 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.25□□□□□ -1.57
SMARCA1P28370 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AC234782.5-201ENST00000617723 324 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AC022106.2-201ENST00000620114 757 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AP005019.3-201ENST00000620418 560 ntBASIC5.25□□□□□ -1.57
SMARCA1P28370 AC015871.5-202ENST00000623252 701 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms