Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DMAP28067 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DMAP28067 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DMAP28067 RPL23AP47-201ENST00000408017 460 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 RNU2-65P-201ENST00000410162 185 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 RFESDP1-201ENST00000422350 461 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC006455.6-201ENST00000426192 893 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 NEK4P1-201ENST00000433383 879 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 BX276092.4-201ENST00000452056 248 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 PTGES3P5-201ENST00000455109 434 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC011276.1-201ENST00000469688 323 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DMAP28067 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 RNU6-751P-201ENST00000516382 101 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AP006245.1-201ENST00000522549 120 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 YPEL5P3-201ENST00000547227 352 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AL121594.4-201ENST00000556211 1196 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC006116.5-201ENST00000591936 559 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 SNRPGP15-201ENST00000600149 222 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DMAP28067 MIR8059-201ENST00000620427 81 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 MIR7703-201ENST00000620784 77 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC110801.1-201ENST00000623590 212 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
HLA-DMAP28067 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DMAP28067 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DMAP28067 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DMAP28067 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DMAP28067 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC007823.1-201ENST00000569932 1566 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMAP28067 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 RNU6-600P-201ENST00000362524 99 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 RNA5SP509-201ENST00000364577 119 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMAP28067 RN7SKP33-201ENST00000410942 340 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC012498.1-201ENST00000424037 437 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 NDUFB1P1-201ENST00000435191 180 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 HMGN2P20-201ENST00000437531 273 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC006480.1-201ENST00000449887 378 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMAP28067 HMGN1P18-201ENST00000457642 277 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 RPL5P24-201ENST00000463742 885 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 PCNAP1-201ENST00000505363 709 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 RN7SKP244-201ENST00000516513 307 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 IGKV2D-19-201ENST00000523346 262 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC245128.3-201ENST00000594721 748 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 IPO5P1-202ENST00000600039 287 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AL354760.1-201ENST00000608357 643 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC079684.1-201ENST00000621405 437 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 MIR3653-201ENST00000625572 110 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AL136164.4-201ENST00000625013 2135 ntBASIC3.17□□□□□ -1.9
HLA-DMAP28067 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DMAP28067 AC139713.2-214ENST00000642059 1811 ntBASIC3.16□□□□□ -1.9
HLA-DMAP28067 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMAP28067 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DMAP28067 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.16□□□□□ -1.9
HLA-DMAP28067 AC005261.4-201ENST00000600047 1385 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms