Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 OR51A3P-201ENST00000413596 924 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AC004987.3-201ENST00000413879 771 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFRAP16234 ELOCP6-201ENST00000429066 328 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFRAP16234 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFRAP16234 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFRAP16234 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFRAP16234 ELOCP8-201ENST00000439309 332 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.27□□□□□ -1.73
PDGFRAP16234 ELOCP15-201ENST00000442090 332 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFRAP16234 RAB11AP1-201ENST00000442978 646 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFRAP16234 ELOCP12-201ENST00000458706 328 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 snoU13.7-201ENST00000459220 104 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 RPL38P1-201ENST00000460914 211 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AP000893.1-201ENST00000474462 794 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFRAP16234 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 MIR2116-201ENST00000517221 80 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.27□□□□□ -1.73
PDGFRAP16234 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 MTND2P26-201ENST00000528255 1029 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 PTP4A1P6-201ENST00000531034 478 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
PDGFRAP16234 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.27□□□□□ -1.73
PDGFRAP16234 NIFKP8-201ENST00000560500 874 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AC025627.2-201ENST00000576220 160 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AP003117.2-201ENST00000606010 545 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 MIR6867-201ENST00000610636 67 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 AL512427.1-201ENST00000618593 349 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 RMST_9.1-201ENST00000619945 193 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFRAP16234 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PDGFRAP16234 AC139713.2-210ENST00000641741 992 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PDGFRAP16234 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 AC107081.3-201ENST00000612715 2034 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 SGO1P1-201ENST00000603525 1447 ntBASIC4.27□□□□□ -1.73
PDGFRAP16234 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.27□□□□□ -1.73
PDGFRAP16234 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.27□□□□□ -1.73
PDGFRAP16234 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDGFRAP16234 AC011978.2-201ENST00000569835 2054 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFRAP16234 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFRAP16234 SPRR2C-201ENST00000290702 219 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PDGFRAP16234 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFRAP16234 RNA5SP515-201ENST00000364570 118 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 RHOT1P2-201ENST00000366423 333 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 MIR16-1-201ENST00000385271 89 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PDGFRAP16234 MIR1193-201ENST00000408109 78 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFRAP16234 HSPE1P12-201ENST00000412576 301 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 OR8G2P-201ENST00000412796 908 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AL356095.1-201ENST00000417217 199 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFRAP16234 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.26□□□□□ -1.73
PDGFRAP16234 VDAC1P6-201ENST00000430062 855 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 MTCO1P54-201ENST00000430139 712 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFRAP16234 RPS4XP4-201ENST00000443195 763 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFRAP16234 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFRAP16234 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFRAP16234 SNORD108-201ENST00000459332 71 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 NAP1L1P3-201ENST00000462291 880 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 HMGB1P38-201ENST00000490557 577 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.26□□□□□ -1.73
PDGFRAP16234 MTND3P3-201ENST00000505004 126 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PDGFRAP16234 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFRAP16234 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.26□□□□□ -1.73
PDGFRAP16234 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFRAP16234 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFRAP16234 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.26□□□□□ -1.73
PDGFRAP16234 MIR3160-1-201ENST00000577972 85 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AL133445.2-201ENST00000611191 527 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AL049777.1-201ENST00000622740 518 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AC112484.5-201ENST00000624189 228 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 AC103798.2-201ENST00000624292 632 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PDGFRAP16234 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.26□□□□□ -1.73
PDGFRAP16234 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFRAP16234 ZNF33CP-201ENST00000432492 2030 ntBASIC4.26□□□□□ -1.73
PDGFRAP16234 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFRAP16234 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDGFRAP16234 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.25□□□□□ -1.73
PDGFRAP16234 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 AC097504.1-201ENST00000515103 2415 ntBASIC4.25□□□□□ -1.73
PDGFRAP16234 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
PDGFRAP16234 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.25□□□□□ -1.73
PDGFRAP16234 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDGFRAP16234 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms