Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCNAP12004 RNU6-1066P-201ENST00000363573 105 ntBASIC4.39□□□□□ -1.71
PCNAP12004 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 RAP1BP1-201ENST00000412709 553 ntBASIC4.39□□□□□ -1.71
PCNAP12004 AL139421.1-201ENST00000423010 169 ntBASIC4.39□□□□□ -1.71
PCNAP12004 SKP1P3-201ENST00000429280 487 ntBASIC4.39□□□□□ -1.71
PCNAP12004 RPL23AP25-201ENST00000430973 463 ntBASIC4.39□□□□□ -1.71
PCNAP12004 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.39□□□□□ -1.71
PCNAP12004 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.39□□□□□ -1.71
PCNAP12004 AC104978.1-201ENST00000449387 391 ntBASIC4.39□□□□□ -1.71
PCNAP12004 RPL12P26-201ENST00000452430 487 ntBASIC4.39□□□□□ -1.71
PCNAP12004 ANKRD26P4-201ENST00000455755 950 ntBASIC4.39□□□□□ -1.71
PCNAP12004 RPL35AP28-201ENST00000459730 331 ntBASIC4.39□□□□□ -1.71
PCNAP12004 RPL5P24-201ENST00000463742 885 ntBASIC4.39□□□□□ -1.71
PCNAP12004 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 AC104090.1-201ENST00000506341 1171 ntBASIC4.39□□□□□ -1.71
PCNAP12004 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 RN7SKP96-201ENST00000516948 297 ntBASIC4.39□□□□□ -1.71
PCNAP12004 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 AP000926.4-201ENST00000527351 454 ntBASIC4.39□□□□□ -1.71
PCNAP12004 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.39□□□□□ -1.71
PCNAP12004 AC138915.2-201ENST00000569776 97 ntBASIC4.39□□□□□ -1.71
PCNAP12004 AC103792.1-201ENST00000603591 919 ntBASIC4.39□□□□□ -1.71
PCNAP12004 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.39□□□□□ -1.71
PCNAP12004 AC121761.2-201ENST00000617300 689 ntBASIC4.39□□□□□ -1.71
PCNAP12004 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PCNAP12004 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.39□□□□□ -1.71
PCNAP12004 MIR4278-201ENST00000636094 69 ntBASIC4.39□□□□□ -1.71
PCNAP12004 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.39□□□□□ -1.71
PCNAP12004 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCNAP12004 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.39□□□□□ -1.71
PCNAP12004 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCNAP12004 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCNAP12004 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCNAP12004 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PCNAP12004 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
PCNAP12004 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 AC053481.2-202ENST00000582394 1500 ntBASIC4.38□□□□□ -1.71
PCNAP12004 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 AC103591.2-201ENST00000265259 766 ntBASIC4.38□□□□□ -1.71
PCNAP12004 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCNAP12004 RNA5SP513-201ENST00000364648 118 ntBASIC4.38□□□□□ -1.71
PCNAP12004 HNRNPDP2-201ENST00000406475 478 ntBASIC4.38□□□□□ -1.71
PCNAP12004 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.38□□□□□ -1.71
PCNAP12004 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.38□□□□□ -1.71
PCNAP12004 VDAC1P9-201ENST00000412766 841 ntBASIC4.38□□□□□ -1.71
PCNAP12004 LUZP4P1-201ENST00000415420 344 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 USP9YP11-201ENST00000427537 717 ntBASIC4.38□□□□□ -1.71
PCNAP12004 RPL21P91-201ENST00000429231 479 ntBASIC4.38□□□□□ -1.71
PCNAP12004 RPL36P19-201ENST00000430744 301 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.38□□□□□ -1.71
PCNAP12004 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.38□□□□□ -1.71
PCNAP12004 RPL23AP93-201ENST00000440847 484 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.38□□□□□ -1.71
PCNAP12004 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 ATG12P2-201ENST00000456830 416 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AL133477.1-201ENST00000457472 514 ntBASIC4.38□□□□□ -1.71
PCNAP12004 PNPLA4P1-201ENST00000458328 305 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 AC010307.1-201ENST00000467206 836 ntBASIC4.38□□□□□ -1.71
PCNAP12004 OR52A4P-201ENST00000472867 958 ntBASIC4.38□□□□□ -1.71
PCNAP12004 RPL12P20-201ENST00000475538 479 ntBASIC4.38□□□□□ -1.71
PCNAP12004 RPS3AP22-201ENST00000488297 769 ntBASIC4.38□□□□□ -1.71
PCNAP12004 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCNAP12004 RNA5SP154-201ENST00000516193 111 ntBASIC4.38□□□□□ -1.71
PCNAP12004 SNORA48.10-201ENST00000516965 160 ntBASIC4.38□□□□□ -1.71
PCNAP12004 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCNAP12004 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 OR5AN2P-201ENST00000534535 896 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AC007834.2-201ENST00000536310 343 ntBASIC4.38□□□□□ -1.71
PCNAP12004 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.38□□□□□ -1.71
PCNAP12004 OSBPL9P5-201ENST00000542581 171 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.38□□□□□ -1.71
PCNAP12004 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.38□□□□□ -1.71
PCNAP12004 AC087465.1-201ENST00000560574 245 ntBASIC4.38□□□□□ -1.71
PCNAP12004 MIR4270-201ENST00000581799 70 ntBASIC4.38□□□□□ -1.71
PCNAP12004 MIR4480-201ENST00000582492 71 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.38□□□□□ -1.71
PCNAP12004 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.38□□□□□ -1.71
PCNAP12004 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.38□□□□□ -1.71
PCNAP12004 AL031281.1-201ENST00000604049 488 ntBASIC4.38□□□□□ -1.71
PCNAP12004 HSPE1P14-201ENST00000605812 302 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AC243756.2-201ENST00000618406 463 ntBASIC4.38□□□□□ -1.71
PCNAP12004 AC091905.2-201ENST00000623143 306 ntBASIC4.38□□□□□ -1.71
PCNAP12004 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.38□□□□□ -1.71
PCNAP12004 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms