Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.28□□□□□ -1.72
TOP1P11387 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TOP1P11387 AC069157.1-201ENST00000421749 137 ntBASIC4.28□□□□□ -1.72
TOP1P11387 AC023347.2-201ENST00000433994 462 ntBASIC4.28□□□□□ -1.72
TOP1P11387 SKP1P1-201ENST00000438081 489 ntBASIC4.28□□□□□ -1.72
TOP1P11387 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.28□□□□□ -1.72
TOP1P11387 RPL37P3-201ENST00000456825 293 ntBASIC4.28□□□□□ -1.72
TOP1P11387 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 SNORD105B-201ENST00000458770 79 ntBASIC4.28□□□□□ -1.72
TOP1P11387 SLC25A15P5-201ENST00000508033 253 ntBASIC4.28□□□□□ -1.72
TOP1P11387 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.28□□□□□ -1.72
TOP1P11387 FABP5P6-201ENST00000510588 409 ntBASIC4.28□□□□□ -1.72
TOP1P11387 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.28□□□□□ -1.72
TOP1P11387 RN7SKP83-201ENST00000516512 178 ntBASIC4.28□□□□□ -1.72
TOP1P11387 RNA5SP309-201ENST00000516670 106 ntBASIC4.28□□□□□ -1.72
TOP1P11387 RANP9-201ENST00000519957 271 ntBASIC4.28□□□□□ -1.72
TOP1P11387 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 PTP4A1P6-201ENST00000531034 478 ntBASIC4.28□□□□□ -1.72
TOP1P11387 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 AC074029.2-201ENST00000551045 634 ntBASIC4.28□□□□□ -1.72
TOP1P11387 EIF1AXP2-201ENST00000555940 413 ntBASIC4.28□□□□□ -1.72
TOP1P11387 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 AC020914.6-201ENST00000594327 272 ntBASIC4.28□□□□□ -1.72
TOP1P11387 LLPHP1-201ENST00000603571 367 ntBASIC4.28□□□□□ -1.72
TOP1P11387 RNA5SP108-201ENST00000605921 117 ntBASIC4.28□□□□□ -1.72
TOP1P11387 MIR6075-201ENST00000620782 95 ntBASIC4.28□□□□□ -1.72
TOP1P11387 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.28□□□□□ -1.72
TOP1P11387 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.28□□□□□ -1.72
TOP1P11387 MTND4P31-201ENST00000425607 1343 ntBASIC4.27□□□□□ -1.73
TOP1P11387 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP1P11387 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP1P11387 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP1P11387 SNORA71.3-201ENST00000362582 128 ntBASIC4.27□□□□□ -1.73
TOP1P11387 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP1P11387 MIR7-1-201ENST00000384871 110 ntBASIC4.27□□□□□ -1.73
TOP1P11387 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.27□□□□□ -1.73
TOP1P11387 RHEBP3-201ENST00000411920 351 ntBASIC4.27□□□□□ -1.73
TOP1P11387 HMGB3P20-201ENST00000417997 600 ntBASIC4.27□□□□□ -1.73
TOP1P11387 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TOP1P11387 RAD1P2-201ENST00000446414 663 ntBASIC4.27□□□□□ -1.73
TOP1P11387 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.27□□□□□ -1.73
TOP1P11387 AC099563.1-201ENST00000456086 418 ntBASIC4.27□□□□□ -1.73
TOP1P11387 AC005726.1-201ENST00000494679 427 ntBASIC4.27□□□□□ -1.73
TOP1P11387 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.27□□□□□ -1.73
TOP1P11387 AC006499.5-201ENST00000505037 514 ntBASIC4.27□□□□□ -1.73
TOP1P11387 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
TOP1P11387 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.27□□□□□ -1.73
TOP1P11387 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TOP1P11387 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.27□□□□□ -1.73
TOP1P11387 AP002812.4-201ENST00000532139 286 ntBASIC4.27□□□□□ -1.73
TOP1P11387 AC091515.1-201ENST00000548110 679 ntBASIC4.27□□□□□ -1.73
TOP1P11387 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP1P11387 MTATP6P25-201ENST00000574491 261 ntBASIC4.27□□□□□ -1.73
TOP1P11387 MIR4644-201ENST00000579929 84 ntBASIC4.27□□□□□ -1.73
TOP1P11387 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.27□□□□□ -1.73
TOP1P11387 ZNF92P3-201ENST00000596594 954 ntBASIC4.27□□□□□ -1.73
TOP1P11387 AC245389.2-201ENST00000616023 576 ntBASIC4.27□□□□□ -1.73
TOP1P11387 AC243756.2-201ENST00000618406 463 ntBASIC4.27□□□□□ -1.73
TOP1P11387 AC242843.1-201ENST00000618702 573 ntBASIC4.27□□□□□ -1.73
TOP1P11387 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP1P11387 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP1P11387 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TOP1P11387 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TOP1P11387 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TOP1P11387 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.26□□□□□ -1.73
TOP1P11387 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP1P11387 HSPA8P1-201ENST00000425843 1833 ntBASIC4.26□□□□□ -1.73
TOP1P11387 MFSD8-236ENST00000641509 4050 ntBASIC4.26□□□□□ -1.73
TOP1P11387 SNORD9-201ENST00000362566 104 ntBASIC4.26□□□□□ -1.73
TOP1P11387 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP1P11387 AL050321.1-201ENST00000432363 400 ntBASIC4.26□□□□□ -1.73
TOP1P11387 NDUFB1P1-201ENST00000435191 180 ntBASIC4.26□□□□□ -1.73
TOP1P11387 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP1P11387 HSPD1P21-201ENST00000436541 245 ntBASIC4.26□□□□□ -1.73
TOP1P11387 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP1P11387 AC009263.1-201ENST00000441193 1239 ntBASIC4.26□□□□□ -1.73
TOP1P11387 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TOP1P11387 AC010655.1-201ENST00000449336 292 ntBASIC4.26□□□□□ -1.73
TOP1P11387 HMGB3P30-201ENST00000457863 606 ntBASIC4.26□□□□□ -1.73
TOP1P11387 HMGN1P15-201ENST00000513870 295 ntBASIC4.26□□□□□ -1.73
TOP1P11387 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.26□□□□□ -1.73
TOP1P11387 AC022784.5-201ENST00000522241 437 ntBASIC4.26□□□□□ -1.73
TOP1P11387 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP1P11387 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP1P11387 AC009101.1-201ENST00000568135 242 ntBASIC4.26□□□□□ -1.73
TOP1P11387 AC053481.3-201ENST00000577881 843 ntBASIC4.26□□□□□ -1.73
TOP1P11387 PCNAP1-202ENST00000595299 752 ntBASIC4.26□□□□□ -1.73
TOP1P11387 AC008739.3-201ENST00000603262 127 ntBASIC4.26□□□□□ -1.73
TOP1P11387 AC084036.1-201ENST00000609190 508 ntBASIC4.26□□□□□ -1.73
TOP1P11387 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TOP1P11387 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.26□□□□□ -1.73
TOP1P11387 AC119674.1-220ENST00000641502 1048 ntBASIC4.26□□□□□ -1.73
TOP1P11387 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP1P11387 AC007823.1-201ENST00000569932 1566 ntBASIC4.26□□□□□ -1.73
TOP1P11387 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TOP1P11387 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.26□□□□□ -1.73
TOP1P11387 RPS4XP5-202ENST00000449995 1334 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms