Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC244453.4-201ENST00000419150 388 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 ISCA1P2-201ENST00000438679 421 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC092013.1-201ENST00000438795 332 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 OR6C72P-201ENST00000451403 892 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 SNORA84-201ENST00000459229 133 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC108078.3-201ENST00000502633 489 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 NPM1P35-201ENST00000533043 868 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 AL020997.2-201ENST00000602607 184 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC090953.1-201ENST00000604305 1092 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 uc_338.1-201ENST00000612113 180 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 AL391597.1-201ENST00000618707 694 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 SNORD39.4-201ENST00000620099 78 ntBASIC3.83□□□□□ -1.8
CTDNEP1O95476 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CTDNEP1O95476 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
CTDNEP1O95476 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC007529.1-201ENST00000418574 2178 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTDNEP1O95476 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 RNU1-33P-201ENST00000364249 162 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTDNEP1O95476 ATP5F1P3-201ENST00000397213 657 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 SKINT1L-201ENST00000401057 817 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 HMGN1P24-201ENST00000412282 298 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC063979.1-201ENST00000415539 377 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 CYP4F29P-201ENST00000420685 446 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 FAR1P1-201ENST00000427163 934 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 BX890604.2-201ENST00000427883 474 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 AL159987.2-201ENST00000432754 307 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 RAB28P3-201ENST00000448325 597 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 RPS4XP10-201ENST00000465034 731 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 SNORD116-26-201ENST00000516006 96 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 OR8I1P-201ENST00000529291 931 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC007424.1-203ENST00000554613 687 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC010680.3-201ENST00000604215 520 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 AC010200.2-201ENST00000605098 235 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 U3.45-201ENST00000607547 219 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 MIR6798-201ENST00000612887 67 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 AL355365.1-201ENST00000616480 294 ntBASIC3.82□□□□□ -1.8
CTDNEP1O95476 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CTDNEP1O95476 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTDNEP1O95476 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTDNEP1O95476 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC007342.7-201ENST00000624610 2337 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC008725.1-201ENST00000605123 2263 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTDNEP1O95476 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC012065.2-201ENST00000421295 375 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 PDSS1P2-201ENST00000449397 678 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 RPL7P31-201ENST00000450192 724 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC006539.3-201ENST00000454258 129 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC091564.1-201ENST00000464563 479 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 OR5H3P-201ENST00000502817 919 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC108043.1-201ENST00000512696 574 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 FABP5P12-201ENST00000515543 389 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 IGHV3-32-201ENST00000519182 355 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC004024.1-201ENST00000549244 247 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC015917.1-201ENST00000579654 510 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC034236.3-201ENST00000605999 461 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC019131.2-201ENST00000609071 870 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 AC009464.1-201ENST00000615731 469 ntBASIC3.81□□□□□ -1.8
CTDNEP1O95476 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CTDNEP1O95476 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTDNEP1O95476 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTDNEP1O95476 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.8□□□□□ -1.8
CTDNEP1O95476 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTDNEP1O95476 RPL7P26-201ENST00000333817 754 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms