Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HCN1O60741 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.68□□□□□ -1.82
HCN1O60741 AL138799.3-201ENST00000438968 350 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AC122718.1-201ENST00000439448 744 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 RPS4XP4-201ENST00000443195 763 ntBASIC3.68□□□□□ -1.82
HCN1O60741 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.68□□□□□ -1.82
HCN1O60741 AC092685.1-201ENST00000447960 1243 ntBASIC3.68□□□□□ -1.82
HCN1O60741 CYCSP53-201ENST00000455540 265 ntBASIC3.68□□□□□ -1.82
HCN1O60741 RPS20P32-201ENST00000456044 356 ntBASIC3.68□□□□□ -1.82
HCN1O60741 FAM133DP-201ENST00000464802 691 ntBASIC3.68□□□□□ -1.82
HCN1O60741 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.68□□□□□ -1.82
HCN1O60741 AC010307.1-201ENST00000467206 836 ntBASIC3.68□□□□□ -1.82
HCN1O60741 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 TMED11P-201ENST00000479478 690 ntBASIC3.68□□□□□ -1.82
HCN1O60741 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.68□□□□□ -1.82
HCN1O60741 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 MTCO1P30-201ENST00000515244 580 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HCN1O60741 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN1O60741 AC022968.1-201ENST00000567372 442 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AC025627.2-201ENST00000576220 160 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AC244505.7-201ENST00000599675 272 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AC114878.2-201ENST00000604863 1251 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AC090912.3-201ENST00000609775 533 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AL591424.2-201ENST00000617023 128 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 OR5BE1P-202ENST00000641168 1176 ntBASIC3.68□□□□□ -1.82
HCN1O60741 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HCN1O60741 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HCN1O60741 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HCN1O60741 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
HCN1O60741 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCN1O60741 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.67□□□□□ -1.82
HCN1O60741 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCN1O60741 HSPA8P19-201ENST00000505359 1517 ntBASIC3.67□□□□□ -1.82
HCN1O60741 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCN1O60741 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.67□□□□□ -1.82
HCN1O60741 RNU6-543P-201ENST00000362576 108 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN1O60741 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.67□□□□□ -1.82
HCN1O60741 RNU2-72P-201ENST00000411175 163 ntBASIC3.67□□□□□ -1.82
HCN1O60741 RNU2-6P-201ENST00000411404 190 ntBASIC3.67□□□□□ -1.82
HCN1O60741 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN1O60741 AL691449.1-201ENST00000426570 421 ntBASIC3.67□□□□□ -1.82
HCN1O60741 HMGB3P5-201ENST00000428894 612 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AL358472.1-201ENST00000431295 329 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN1O60741 MTCO3P20-201ENST00000454926 688 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AC078817.1-201ENST00000492623 435 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AP001086.1-201ENST00000494882 321 ntBASIC3.67□□□□□ -1.82
HCN1O60741 RPL5P23-201ENST00000496040 868 ntBASIC3.67□□□□□ -1.82
HCN1O60741 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.67□□□□□ -1.82
HCN1O60741 KRT19P6-201ENST00000510983 209 ntBASIC3.67□□□□□ -1.82
HCN1O60741 MTND4LP31-201ENST00000514859 294 ntBASIC3.67□□□□□ -1.82
HCN1O60741 RNU2-58P-201ENST00000516403 183 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.67□□□□□ -1.82
HCN1O60741 MTND1P6-201ENST00000523621 946 ntBASIC3.67□□□□□ -1.82
HCN1O60741 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCN1O60741 AC091516.1-201ENST00000549191 703 ntBASIC3.67□□□□□ -1.82
HCN1O60741 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.67□□□□□ -1.82
HCN1O60741 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.67□□□□□ -1.82
HCN1O60741 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.67□□□□□ -1.82
HCN1O60741 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.67□□□□□ -1.82
HCN1O60741 AC007687.1-201ENST00000602704 304 ntBASIC3.67□□□□□ -1.82
HCN1O60741 Z82195.1-201ENST00000604558 398 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.67□□□□□ -1.82
HCN1O60741 AL163051.2-201ENST00000618976 735 ntBASIC3.67□□□□□ -1.82
HCN1O60741 U7.8-201ENST00000619968 63 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.67□□□□□ -1.82
HCN1O60741 MIR6500-201ENST00000622700 86 ntBASIC3.67□□□□□ -1.82
HCN1O60741 AC006065.5-201ENST00000623427 349 ntBASIC3.67□□□□□ -1.82
HCN1O60741 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCN1O60741 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCN1O60741 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCN1O60741 AL161912.2-201ENST00000565707 3007 ntBASIC3.67□□□□□ -1.82
HCN1O60741 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HCN1O60741 MAPK10-372ENST00000641954 3413 ntBASIC3.67□□□□□ -1.82
HCN1O60741 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.67□□□□□ -1.82
HCN1O60741 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCN1O60741 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HCN1O60741 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN1O60741 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
HCN1O60741 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCN1O60741 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
HCN1O60741 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HCN1O60741 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.66□□□□□ -1.82
HCN1O60741 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms