Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 OR4T1P-201ENST00000554933 911 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 PARP1P2-201ENST00000556806 195 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.63□□□□□ -1.99
SSSCA1O60232 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 MIR5685-201ENST00000579080 79 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AP001180.3-201ENST00000582221 145 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AC011468.4-201ENST00000603942 409 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 MIR7641-1-201ENST00000627518 61 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AC108206.1-201ENST00000570186 4159 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 MTND5P19-201ENST00000424872 1794 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.63□□□□□ -1.99
SSSCA1O60232 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.63□□□□□ -1.99
SSSCA1O60232 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 U8.11-201ENST00000384699 133 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 U8.12-201ENST00000384701 133 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 AL445189.1-201ENST00000405722 338 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.62□□□□□ -1.99
SSSCA1O60232 AL035423.1-201ENST00000420331 213 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 AC012498.1-201ENST00000424037 437 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.62□□□□□ -1.99
SSSCA1O60232 SETP5-201ENST00000437270 562 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.62□□□□□ -1.99
SSSCA1O60232 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.62□□□□□ -1.99
SSSCA1O60232 U8.18-201ENST00000459285 133 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 PLGLA-201ENST00000465668 449 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 RN7SL132P-201ENST00000478131 296 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 AC016687.1-201ENST00000482574 353 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 RPL12P22-201ENST00000519073 490 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.62□□□□□ -1.99
SSSCA1O60232 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
SSSCA1O60232 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.62□□□□□ -1.99
SSSCA1O60232 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.62□□□□□ -1.99
SSSCA1O60232 AC020914.6-201ENST00000594327 272 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.62□□□□□ -1.99
SSSCA1O60232 AC099669.2-201ENST00000616549 437 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 MIR6730-201ENST00000622213 67 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 AC007256.1-201ENST00000392253 2765 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 AL353743.1-202ENST00000431724 1695 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 DCAF13P1-201ENST00000495256 1330 ntBASIC2.62□□□□□ -1.99
SSSCA1O60232 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSSCA1O60232 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSSCA1O60232 SNORA51.4-201ENST00000364993 124 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 OR13C3-201ENST00000374781 1108 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 HSPE1P26-201ENST00000405341 275 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.61□□□□□ -1.99
SSSCA1O60232 NDUFB4P5-201ENST00000415445 361 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.61□□□□□ -1.99
SSSCA1O60232 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.61□□□□□ -1.99
SSSCA1O60232 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.61□□□□□ -1.99
SSSCA1O60232 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.61□□□□□ -1.99
SSSCA1O60232 TRIAP1P1-201ENST00000427062 225 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 MTCO1P43-201ENST00000431831 488 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 AL035458.1-201ENST00000433096 585 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.61□□□□□ -1.99
SSSCA1O60232 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.61□□□□□ -1.99
SSSCA1O60232 RPL7P59-201ENST00000447700 943 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 SLC31A1P1-201ENST00000451221 567 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 AC073387.1-201ENST00000453261 709 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.61□□□□□ -1.99
SSSCA1O60232 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSSCA1O60232 AC025518.1-201ENST00000479856 347 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSSCA1O60232 AC010265.1-201ENST00000513509 211 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 RN7SKP122-201ENST00000515923 296 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 RN7SKP18-201ENST00000516005 275 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 RNU6-943P-201ENST00000516960 98 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.61□□□□□ -1.99
SSSCA1O60232 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.61□□□□□ -1.99
SSSCA1O60232 HSPE1P5-201ENST00000561489 272 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 AC055876.1-202ENST00000567053 138 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 PSMA6P4-201ENST00000603247 718 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 SNORA51-201ENST00000606420 132 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSSCA1O60232 AL355480.1-201ENST00000629041 99 ntBASIC2.61□□□□□ -1.99
SSSCA1O60232 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC2.61□□□□□ -1.99
SSSCA1O60232 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SSSCA1O60232 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSSCA1O60232 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.61□□□□□ -1.99
SSSCA1O60232 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSSCA1O60232 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.6□□□□□ -1.99
SSSCA1O60232 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
SSSCA1O60232 HSPA8P19-201ENST00000505359 1517 ntBASIC2.6□□□□□ -1.99
SSSCA1O60232 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSSCA1O60232 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.6□□□□□ -1.99
SSSCA1O60232 MIR323B-201ENST00000385269 82 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms