Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 FTH1P2-201ENST00000466086 412 ntBASIC4.81□□□□□ -1.64
PROM1O43490 AC015724.1-201ENST00000478577 156 ntBASIC4.81□□□□□ -1.64
PROM1O43490 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.81□□□□□ -1.64
PROM1O43490 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.81□□□□□ -1.64
PROM1O43490 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.81□□□□□ -1.64
PROM1O43490 MTCO1P30-201ENST00000515244 580 ntBASIC4.81□□□□□ -1.64
PROM1O43490 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 PSMB7P1-201ENST00000556349 514 ntBASIC4.81□□□□□ -1.64
PROM1O43490 NDUFB4P11-201ENST00000560510 395 ntBASIC4.81□□□□□ -1.64
PROM1O43490 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.81□□□□□ -1.64
PROM1O43490 AP001596.2-201ENST00000608410 312 ntBASIC4.81□□□□□ -1.64
PROM1O43490 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 AC024941.1-201ENST00000612250 334 ntBASIC4.81□□□□□ -1.64
PROM1O43490 AC013476.2-201ENST00000614456 459 ntBASIC4.81□□□□□ -1.64
PROM1O43490 AC138932.5-201ENST00000617759 563 ntBASIC4.81□□□□□ -1.64
PROM1O43490 U6.42-201ENST00000618440 107 ntBASIC4.81□□□□□ -1.64
PROM1O43490 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 MIR6810-201ENST00000622701 70 ntBASIC4.81□□□□□ -1.64
PROM1O43490 SEPT14P19-203ENST00000633205 211 ntBASIC4.81□□□□□ -1.64
PROM1O43490 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 MKKS-204ENST00000639674 192 ntBASIC4.81□□□□□ -1.64
PROM1O43490 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PROM1O43490 MTCO1P23-201ENST00000415223 1526 ntBASIC4.81□□□□□ -1.64
PROM1O43490 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PROM1O43490 CDR1-202ENST00000625883 1485 ntBASIC4.81□□□□□ -1.64
PROM1O43490 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.81□□□□□ -1.64
PROM1O43490 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PROM1O43490 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
PROM1O43490 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.8□□□□□ -1.64
PROM1O43490 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PROM1O43490 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PROM1O43490 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PROM1O43490 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PROM1O43490 RNU6-492P-201ENST00000363035 104 ntBASIC4.8□□□□□ -1.64
PROM1O43490 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.8□□□□□ -1.64
PROM1O43490 RNU6-317P-201ENST00000384031 107 ntBASIC4.8□□□□□ -1.64
PROM1O43490 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PROM1O43490 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.8□□□□□ -1.64
PROM1O43490 RPL31P52-201ENST00000407532 367 ntBASIC4.8□□□□□ -1.64
PROM1O43490 RN7SKP16-201ENST00000410180 299 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 RPS7P13-201ENST00000413955 498 ntBASIC4.8□□□□□ -1.64
PROM1O43490 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.8□□□□□ -1.64
PROM1O43490 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 RPS27AP7-201ENST00000422792 455 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.8□□□□□ -1.64
PROM1O43490 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.8□□□□□ -1.64
PROM1O43490 BX323845.1-201ENST00000432417 179 ntBASIC4.8□□□□□ -1.64
PROM1O43490 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AC091862.1-201ENST00000438016 1100 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AL512286.1-201ENST00000439244 400 ntBASIC4.8□□□□□ -1.64
PROM1O43490 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.8□□□□□ -1.64
PROM1O43490 CBX1P4-201ENST00000439415 457 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PROM1O43490 HMGB3P9-201ENST00000441799 583 ntBASIC4.8□□□□□ -1.64
PROM1O43490 RPL7AP61-201ENST00000443410 636 ntBASIC4.8□□□□□ -1.64
PROM1O43490 RPL30P9-201ENST00000465586 330 ntBASIC4.8□□□□□ -1.64
PROM1O43490 BX284632.1-201ENST00000478218 541 ntBASIC4.8□□□□□ -1.64
PROM1O43490 HMGN2P25-201ENST00000486956 268 ntBASIC4.8□□□□□ -1.64
PROM1O43490 RPS27P23-201ENST00000487608 251 ntBASIC4.8□□□□□ -1.64
PROM1O43490 RPL7P38-201ENST00000488396 739 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 AC096751.1-202ENST00000502691 1067 ntBASIC4.8□□□□□ -1.64
PROM1O43490 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 NRON-201ENST00000517270 370 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AF186190.1-201ENST00000517470 480 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AC008802.1-201ENST00000519121 791 ntBASIC4.8□□□□□ -1.64
PROM1O43490 NPM1P6-201ENST00000521088 871 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.8□□□□□ -1.64
PROM1O43490 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.8□□□□□ -1.64
PROM1O43490 CCNG2P1-201ENST00000549521 1000 ntBASIC4.8□□□□□ -1.64
PROM1O43490 ZNF519P3-201ENST00000557158 1032 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.8□□□□□ -1.64
PROM1O43490 AC090515.3-201ENST00000560431 315 ntBASIC4.8□□□□□ -1.64
PROM1O43490 PCMTD1P2-201ENST00000565017 355 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.8□□□□□ -1.64
PROM1O43490 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.8□□□□□ -1.64
PROM1O43490 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AP002799.1-201ENST00000623552 423 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AC079228.1-201ENST00000624774 1049 ntBASIC4.8□□□□□ -1.64
PROM1O43490 AC099654.12-201ENST00000639868 649 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms