Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC067959.1-201ENST00000604334 379 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC005021.1-201ENST00000608730 355 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 ZYXP1-201ENST00000617638 118 ntBASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM49D1C9J1S8 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 RN7SKP44-201ENST00000363602 316 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 SNORD115-48-201ENST00000364764 76 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 RNA5SP283-201ENST00000365604 119 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 MT-TP-201ENST00000387461 68 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-796P-201ENST00000391086 107 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 GSTA12P-201ENST00000402398 508 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL355143.1-201ENST00000407101 841 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC073069.1-201ENST00000428657 441 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 ZNF965P-201ENST00000432501 817 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 BX679664.1-201ENST00000434429 253 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC093716.1-201ENST00000435923 377 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL513321.1-201ENST00000441175 761 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC007000.2-201ENST00000442564 487 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 MTCYBP21-201ENST00000443300 1113 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL357552.1-201ENST00000445254 415 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL627224.1-201ENST00000448334 444 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AP000563.1-201ENST00000490865 758 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL139099.1-201ENST00000497398 403 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 CDH12P2-201ENST00000504393 298 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 NAMPTP2-201ENST00000505629 1115 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC010460.1-201ENST00000507087 466 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC016550.3-201ENST00000515706 767 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 RNU6-347P-201ENST00000516658 105 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 MIR5187-201ENST00000583479 76 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 ABI1P1-201ENST00000603375 1120 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC019131.2-201ENST00000609071 870 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL354798.1-201ENST00000622505 329 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AC097460.3-201ENST00000623099 442 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 AL139811.1-201ENST00000424779 2299 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 ASNSP1-204ENST00000641977 1664 ntBASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.55□□□□□ -1.84
TRIM49D1C9J1S8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 ATP5F1P6-201ENST00000402768 767 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 MIR1193-201ENST00000408109 78 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 RNU4-27P-201ENST00000410889 139 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL445183.3-201ENST00000414168 502 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 LIPT1P1-201ENST00000415870 1186 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL606490.7-201ENST00000433136 191 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 RNFT1P2-201ENST00000443064 757 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 RPL12P26-201ENST00000452430 487 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 CALM1P2-201ENST00000452941 448 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AL133162.1-201ENST00000463228 453 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 RN7SL594P-201ENST00000470590 287 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 CYCSP20-201ENST00000473154 315 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 MTND6P6-201ENST00000478031 263 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 SETP14-201ENST00000497538 873 ntBASIC3.54□□□□□ -1.84
TRIM49D1C9J1S8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms