Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 SRGNP1-201ENST00000603392 451 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 RPL21P136-201ENST00000605378 396 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 MIR1264-201ENST00000616374 69 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AC006213.5-201ENST00000619673 288 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AC103858.2-201ENST00000621471 543 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AP003355.3-201ENST00000623465 114 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 KPNA2P2-201ENST00000419546 1489 ntBASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SMIM28A0A1B0GU29 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AL592437.2-201ENST00000421655 2434 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 RNA5SP50-201ENST00000363731 107 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC234772.1-201ENST00000377927 937 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 RNU6-452P-201ENST00000384406 107 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 MIR34B-201ENST00000385076 84 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 RN7SKP53-201ENST00000411337 315 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 XKRYP4-201ENST00000414395 483 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 RPS7P15-201ENST00000415804 584 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 MTND2P11-201ENST00000423638 648 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 IFNNP1-201ENST00000429219 553 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 MOB1AP1-201ENST00000430903 535 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 XKRYP5-201ENST00000449659 483 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 PPIAP3-201ENST00000450588 505 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC025518.1-201ENST00000479856 347 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 SYT14P1-201ENST00000481459 721 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC010468.3-201ENST00000508225 458 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 SNORA76.2-201ENST00000517095 137 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC107016.1-201ENST00000550463 337 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC005412.1-201ENST00000580812 1049 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 ELOCP35-201ENST00000604289 336 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 SUMO2P14-201ENST00000604488 293 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC012468.1-201ENST00000604888 430 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC007423.1-201ENST00000605009 627 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC090525.3-201ENST00000605601 189 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC017076.1-201ENST00000607613 578 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AC007342.8-201ENST00000623278 678 ntBASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMIM28A0A1B0GU29 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 FRG1CP-201ENST00000358464 769 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RNU6-792P-201ENST00000363490 107 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RNA5SP42-201ENST00000364278 115 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RNU6-1005P-201ENST00000384519 107 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RNU6-796P-201ENST00000391086 107 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 U3.39-201ENST00000408569 239 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC017079.2-201ENST00000416102 485 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 LINC01347-201ENST00000417964 355 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC097713.2-201ENST00000430199 356 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RPL7P4-203ENST00000430239 730 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RPL21P110-201ENST00000433345 446 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RNFT1P2-201ENST00000443064 757 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RPL26P28-201ENST00000451325 435 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 PLGLA-201ENST00000465668 449 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC026784.1-201ENST00000507986 352 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 RN7SKP83-201ENST00000516512 178 ntBASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.81□□□□□ -1.8
SMIM28A0A1B0GU29 AC008489.1-201ENST00000524271 483 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms