Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FGF7P2-201ENST00000332473 296 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 Y_RNA.505-201ENST00000384489 102 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC016769.3-201ENST00000396562 315 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC007899.1-201ENST00000412776 775 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 RPSAP35-201ENST00000413753 818 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 RPS7P13-201ENST00000413955 498 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 TPMTP2-201ENST00000414372 726 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 COX5BP7-201ENST00000414780 274 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 RPL37P21-201ENST00000435890 276 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 LARP1BP3-201ENST00000437229 869 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 CDC27P1-201ENST00000445384 715 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AP000936.2-201ENST00000447151 681 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AL592447.1-201ENST00000447592 540 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC104073.1-201ENST00000451988 151 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC108161.1-201ENST00000461060 402 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC021660.1-201ENST00000465006 554 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC009127.1-201ENST00000467090 155 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 PABPC1P3-201ENST00000469174 459 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC104563.1-201ENST00000476147 376 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC108941.1-201ENST00000502853 530 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 RN7SKP147-201ENST00000517154 244 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC022861.1-201ENST00000522981 663 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AP004247.1-201ENST00000531556 1289 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 GTF2IP22-201ENST00000554443 182 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC127024.5-201ENST00000580085 462 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 RN7SL356P-201ENST00000582228 248 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC079089.3-201ENST00000603094 673 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC009597.2-201ENST00000604659 592 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AC103591.3-201ENST00000608684 209 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AP000648.2-201ENST00000624182 404 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 AL353662.3-201ENST00000625131 237 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 PABPC1P9-201ENST00000426076 1612 ntBASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 THAP12P4-201ENST00000528321 2266 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC011155.1-201ENST00000316512 456 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 OR5H15-201ENST00000383696 930 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AL078599.1-201ENST00000402075 293 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 COX6CP17-201ENST00000421389 185 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 RBMY2QP-201ENST00000429799 1147 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 RPL7L1P1-201ENST00000448259 785 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 MTCO1P27-201ENST00000448269 226 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 PRPF38AP1-201ENST00000451976 933 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 HMGB3P21-201ENST00000452483 547 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 RPL5P32-201ENST00000454085 879 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC092754.1-201ENST00000472975 479 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC017015.1-201ENST00000477387 286 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 RN7SL346P-201ENST00000491561 294 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC022447.3-201ENST00000506865 495 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 GTF2F2P1-201ENST00000511083 675 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC004980.4-201ENST00000513375 203 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 BRD9P1-201ENST00000529855 560 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC107918.3-201ENST00000533272 382 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms