Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 CDC42P1-201ENST00000456658 548 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 RPL38P1-201ENST00000460914 211 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC146507.1-201ENST00000468335 354 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-488P-201ENST00000515918 99 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC087894.1-201ENST00000538359 518 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 CENPUP2-201ENST00000555897 1186 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC017100.2-201ENST00000584628 355 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC113194.1-201ENST00000606037 500 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AL133445.2-201ENST00000611191 527 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AL138955.1-201ENST00000622881 1040 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AP003476.1-201ENST00000623984 516 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 SNORA60-201ENST00000362396 134 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 SNORA70E-201ENST00000384492 135 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-272P-201ENST00000411028 104 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AL024507.1-201ENST00000412741 274 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 OR8G2P-201ENST00000412796 908 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 TPT1P2-201ENST00000413105 503 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 RPS12P23-201ENST00000419579 400 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AL391219.1-201ENST00000422570 483 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AL009174.1-201ENST00000426577 416 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 MTCO1P54-201ENST00000430139 712 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AL513175.1-201ENST00000431492 780 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 ELOCP18-201ENST00000434209 337 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 HMGB1P45-201ENST00000435986 653 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 ELOCP8-201ENST00000439309 332 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 ELOCP15-201ENST00000442090 332 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AC004865.1-201ENST00000442276 1003 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 RPS26P56-201ENST00000444468 240 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AL645939.1-201ENST00000453429 797 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 SOD1P3-201ENST00000518682 454 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 IGJP1-201ENST00000522682 475 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AF279873.1-201ENST00000523393 313 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AC023825.1-201ENST00000566704 1030 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AC090666.1-201ENST00000578241 445 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AC006116.7-201ENST00000590141 756 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AC067959.1-201ENST00000604334 379 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AC104662.1-201ENST00000604448 511 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 MIR4496-201ENST00000635896 61 ntBASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.84□□□□□ -1.79
ATG4BQ9Y4P1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
ATG4BQ9Y4P1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.84□□□□□ -1.8
ATG4BQ9Y4P1 MTND5P28-201ENST00000438005 1594 ntBASIC3.84□□□□□ -1.8
ATG4BQ9Y4P1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
ATG4BQ9Y4P1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
ATG4BQ9Y4P1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ATG4BQ9Y4P1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
ATG4BQ9Y4P1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
ATG4BQ9Y4P1 AC107081.3-201ENST00000612715 2034 ntBASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4BQ9Y4P1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms