Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 RNU6-931P-201ENST00000363850 107 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC068538.1-201ENST00000376856 336 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AL049693.1-201ENST00000402760 611 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 OR51A3P-201ENST00000413596 924 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 CYCSP10-201ENST00000417973 294 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 RPL7P44-201ENST00000424827 742 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 IPMKP1-201ENST00000425988 855 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 SEPT7P5-201ENST00000434048 306 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC129850.1-201ENST00000436203 508 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 RPS7P5-201ENST00000441482 581 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AL591503.2-201ENST00000442314 1005 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 MTCO2P18-201ENST00000457151 658 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AL672167.3-201ENST00000465951 960 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 NPM1P47-201ENST00000560843 856 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 ACTR3BP3-201ENST00000565577 979 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 OR4K7P-201ENST00000580232 945 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AL390838.2-201ENST00000602394 274 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AP003973.1-201ENST00000604639 691 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC092653.1-201ENST00000608509 531 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC026585.1-201ENST00000619582 524 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC015908.5-201ENST00000623289 343 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC087359.1-201ENST00000508335 1740 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL391994.1-201ENST00000254724 282 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 RNA5SP447-201ENST00000363749 119 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC004690.1-201ENST00000418216 328 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 RPL12P34-201ENST00000424532 479 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC010153.1-201ENST00000432862 727 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 UBE2V1P5-201ENST00000440070 405 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC092809.1-201ENST00000441469 474 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 RPL7AP61-201ENST00000443410 636 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 MTCO3P16-201ENST00000454456 754 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC008885.2-201ENST00000509506 930 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 snoU109.6-201ENST00000516831 118 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 MIR3915-201ENST00000578518 97 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL133338.2-201ENST00000604292 736 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC064872.1-201ENST00000604823 1072 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AL133243.1-201ENST00000614487 366 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AP005019.3-201ENST00000620418 560 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC067931.1-201ENST00000624190 671 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AP003072.4-201ENST00000624580 310 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC007494.3-201ENST00000624660 743 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 AC116618.1-201ENST00000634617 774 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms