Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 IGLV2-34-201ENST00000490007 283 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC020890.1-201ENST00000491837 504 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC026979.1-201ENST00000492525 396 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 Y_RNA.719-201ENST00000517156 106 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 RNU6-1261P-201ENST00000517194 104 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AP001207.1-201ENST00000524051 481 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC011260.1-201ENST00000578420 472 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AP005119.2-201ENST00000579735 1105 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 RN7SL176P-201ENST00000580352 264 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AP000811.1-201ENST00000603803 651 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 ELOCP34-201ENST00000604436 327 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC009643.2-201ENST00000603543 1448 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AC087359.1-201ENST00000508335 1740 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 AL451142.2-201ENST00000429076 2090 ntBASIC4.68□□□□□ -1.66
VPS4AQ9UN37 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.68□□□□□ -1.66
VPS4AQ9UN37 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 Y_RNA.51-201ENST00000362725 102 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 RNU6-251P-201ENST00000363235 104 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 RPS3AP23-201ENST00000401762 784 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 HNRNPDP2-201ENST00000406475 478 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 RPL23AP47-201ENST00000408017 460 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 RPL6P29-201ENST00000414863 865 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 FCF1P2-201ENST00000415284 583 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 CKS1BP6-201ENST00000424932 240 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC244035.1-201ENST00000430042 390 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AL513175.1-201ENST00000431492 780 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 RPS26P40-201ENST00000435209 294 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 OR7E125P-201ENST00000443450 846 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 RN7SL319P-201ENST00000480656 221 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC080014.1-201ENST00000496877 1201 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 HMGB3P13-201ENST00000511263 607 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AP001189.2-201ENST00000527320 189 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 MIR1254-2-201ENST00000579553 63 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 MIR5096-201ENST00000583713 70 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 VN1R92P-201ENST00000598511 928 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC006539.2-201ENST00000601729 572 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AP001981.2-201ENST00000603241 418 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC105254.2-201ENST00000603636 436 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC069304.2-201ENST00000605154 435 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AL355816.1-201ENST00000607951 118 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC005962.2-201ENST00000611427 652 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AL607023.1-201ENST00000620045 248 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC091931.1-201ENST00000623488 728 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AF246928.1-201ENST00000623768 87 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 OR2L1P-202ENST00000641567 1023 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC107982.1-201ENST00000507171 1300 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC011477.1-204ENST00000623416 1325 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 AL359922.3-201ENST00000624779 1670 ntBASIC4.67□□□□□ -1.66
VPS4AQ9UN37 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS4AQ9UN37 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS4AQ9UN37 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4AQ9UN37 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4AQ9UN37 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS4AQ9UN37 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS4AQ9UN37 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS4AQ9UN37 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 287.9 ms