Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 VTA1P2-201ENST00000520205 911 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 UBE2NP1-201ENST00000545592 458 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 MIR4276-201ENST00000584832 70 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC018692.3-201ENST00000623929 123 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AL356274.2-201ENST00000624379 3752 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AL512649.1-201ENST00000428997 581 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 RPL23AP69-201ENST00000431134 458 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC092641.1-201ENST00000440229 772 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 IGHV3-32-201ENST00000519182 355 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 MIR5195-201ENST00000583555 115 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AL513302.2-201ENST00000562313 1842 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CCDC88CQ9P219 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 RNA5SP229-201ENST00000410809 99 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AL158156.1-201ENST00000422509 473 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 MTCO1P51-201ENST00000427672 1060 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AC006445.1-201ENST00000491925 405 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 RPL7P47-201ENST00000497299 556 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 RFPL4AP3-201ENST00000515267 345 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AC103843.2-201ENST00000530523 682 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AC005476.1-201ENST00000554427 397 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AC122134.1-201ENST00000565664 1104 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 MIR4325-201ENST00000583049 90 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 RNVU1-4-201ENST00000612985 164 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AP003355.3-201ENST00000623465 114 ntBASIC3.21□□□□□ -1.9
CCDC88CQ9P219 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CCDC88CQ9P219 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 ISCA1P2-201ENST00000438679 421 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 NDUFS5P3-201ENST00000450668 321 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC073387.1-201ENST00000453261 709 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 RBMY2UP-201ENST00000453474 324 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC018442.3-201ENST00000523025 183 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AP000926.4-201ENST00000527351 454 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC011602.1-201ENST00000546484 331 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 GTF2IP8-201ENST00000560687 584 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AGGF1P8-201ENST00000562979 1000 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC067838.1-201ENST00000606064 577 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC026422.1-201ENST00000623961 452 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 RPL23AP57-201ENST00000332361 466 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 SNORA81-201ENST00000408493 178 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 RPS7P13-201ENST00000413955 498 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 EIF2S2P4-201ENST00000461070 984 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 METTL15P1-201ENST00000481421 1045 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC097462.2-201ENST00000504623 481 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 FCF1P8-201ENST00000510322 597 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 HIGD1AP1-201ENST00000550979 275 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AL732618.1-201ENST00000623251 301 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 AL133383.2-201ENST00000622958 2336 ntBASIC3.2□□□□□ -1.9
CCDC88CQ9P219 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC88CQ9P219 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms