Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.1□□□□□ -1.75
HACD3Q9P035 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.1□□□□□ -1.75
HACD3Q9P035 AC025627.2-201ENST00000576220 160 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.1□□□□□ -1.75
HACD3Q9P035 MRPS35P3-201ENST00000603189 709 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 AC119501.1-201ENST00000603646 475 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 AC010680.3-201ENST00000604215 520 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 AC114878.2-201ENST00000604863 1251 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 AL451044.1-201ENST00000604867 238 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 AC006946.3-201ENST00000609791 756 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 AC022960.3-201ENST00000619794 441 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 AC090506.2-201ENST00000624521 419 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.1□□□□□ -1.75
HACD3Q9P035 MIR492-201ENST00000638676 116 ntBASIC4.1□□□□□ -1.75
HACD3Q9P035 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HACD3Q9P035 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HACD3Q9P035 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HACD3Q9P035 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HACD3Q9P035 AP001486.2-201ENST00000561652 5113 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 XIAPP3-201ENST00000312918 795 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC126755.2-208ENST00000327792 462 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC007685.1-201ENST00000329806 452 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC138969.1-213ENST00000331436 462 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 SNORD35B-201ENST00000363660 87 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 SNORA70C-201ENST00000384538 135 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 RNU11-4P-201ENST00000391149 133 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AL603865.2-201ENST00000401679 213 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 DNAJC19P6-201ENST00000401853 280 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC092638.1-201ENST00000411966 1275 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 HSPE1P12-201ENST00000412576 301 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.09□□□□□ -1.75
HACD3Q9P035 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 AC246680.2-201ENST00000422106 389 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 C4BPAP2-201ENST00000428434 478 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AL358472.1-201ENST00000431295 329 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.09□□□□□ -1.75
HACD3Q9P035 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 RPS26P30-201ENST00000443431 335 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.09□□□□□ -1.75
HACD3Q9P035 SEPT14P24-201ENST00000447236 180 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AL050341.1-201ENST00000447743 313 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 TPT1P12-201ENST00000448968 492 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.09□□□□□ -1.75
HACD3Q9P035 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.09□□□□□ -1.75
HACD3Q9P035 AC023050.1-201ENST00000498198 304 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 IGBP1P5-201ENST00000507524 1000 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.09□□□□□ -1.75
HACD3Q9P035 HMGB1P23-201ENST00000518743 568 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 IGKV2-36-201ENST00000519999 223 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.09□□□□□ -1.75
HACD3Q9P035 TOMM20P2-201ENST00000540082 421 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.09□□□□□ -1.75
HACD3Q9P035 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.09□□□□□ -1.75
HACD3Q9P035 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.09□□□□□ -1.75
HACD3Q9P035 AC007599.1-201ENST00000568688 1174 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC079171.1-201ENST00000568788 914 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.09□□□□□ -1.75
HACD3Q9P035 AC069366.1-201ENST00000583159 838 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.09□□□□□ -1.75
HACD3Q9P035 VN1R79P-201ENST00000593540 513 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.09□□□□□ -1.75
HACD3Q9P035 AC069431.2-201ENST00000604149 1099 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AL121652.1-201ENST00000608851 448 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 MIR378J-201ENST00000611988 109 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 MIR6758-201ENST00000620653 63 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AP003485.1-201ENST00000625093 753 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 ATE1-AS1-202ENST00000636460 506 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 AC099654.9-201ENST00000637055 678 ntBASIC4.09□□□□□ -1.75
HACD3Q9P035 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.09□□□□□ -1.75
HACD3Q9P035 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HACD3Q9P035 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.09□□□□□ -1.76
HACD3Q9P035 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.08□□□□□ -1.76
HACD3Q9P035 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.08□□□□□ -1.76
HACD3Q9P035 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HACD3Q9P035 RPL32P3-201ENST00000359025 275 ntBASIC4.08□□□□□ -1.76
HACD3Q9P035 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HACD3Q9P035 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HACD3Q9P035 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.08□□□□□ -1.76
HACD3Q9P035 MIR1251-201ENST00000408552 70 ntBASIC4.08□□□□□ -1.76
HACD3Q9P035 RNU2-6P-201ENST00000411404 190 ntBASIC4.08□□□□□ -1.76
HACD3Q9P035 TPT1P2-201ENST00000413105 503 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms