Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 U3.7-201ENST00000363668 216 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 SNORA62.2-201ENST00000364672 152 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 RN7SKP269-201ENST00000365545 319 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 RNU6-483P-201ENST00000384088 108 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 U3.25-201ENST00000391209 220 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 RNA5SP498-201ENST00000411342 120 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 RPSAP35-201ENST00000413753 818 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 USP9YP27-201ENST00000418455 438 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AL953862.1-201ENST00000423016 168 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 SRSF1P1-201ENST00000424058 520 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 USP9YP36-201ENST00000424581 829 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC104850.1-201ENST00000435940 476 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC092809.1-201ENST00000441469 474 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 GAPDHP25-201ENST00000447061 1001 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 PMCHL2-203ENST00000457791 237 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AL133445.1-201ENST00000467051 452 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC092754.1-201ENST00000472975 479 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 COX6B1P2-201ENST00000489624 230 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 SAP18P1-201ENST00000512058 390 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 HMGB1P40-201ENST00000525121 540 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 DEFB131D-201ENST00000526803 184 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC073091.2-201ENST00000603205 907 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC112191.3-201ENST00000604371 277 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC000068.2-201ENST00000608816 460 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 MIR6133-201ENST00000617057 108 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AL356274.1-201ENST00000617064 410 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AL139089.1-201ENST00000620372 975 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC019278.1-201ENST00000623516 479 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 AC024614.3-201ENST00000637860 256 ntBASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PARPBPQ9NWS1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AC117529.2-201ENST00000512159 2068 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 RN7SKP145-201ENST00000363291 303 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 MT-TD-201ENST00000387419 68 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 RNA5SP487-201ENST00000410186 122 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AMD1P2-201ENST00000412936 992 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AL139128.1-201ENST00000413921 941 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AL133482.1-201ENST00000415988 498 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 USP9YP20-201ENST00000419224 558 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 NDUFB4P8-201ENST00000435351 367 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 CYCSP12-201ENST00000437729 300 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AL935212.3-201ENST00000450729 284 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AL590365.1-201ENST00000450788 243 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 SNRPFP4-201ENST00000456366 242 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AC022364.2-201ENST00000457963 554 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AC015724.1-201ENST00000478577 156 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 ACTR3P3-201ENST00000480448 893 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AC022133.1-201ENST00000490961 571 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AC117522.3-201ENST00000507974 584 ntBASIC4.81□□□□□ -1.64
PARPBPQ9NWS1 AC091912.1-201ENST00000511351 248 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms