Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC090525.3-201ENST00000605601 189 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 CR392039.4-201ENST00000624968 501 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RPS4XP5-202ENST00000449995 1334 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 GABPAP-201ENST00000419271 1356 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC006042.3-201ENST00000454684 1469 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AC119744.1-201ENST00000454746 1715 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 AF127577.6-201ENST00000623352 2191 ntBASIC3.58□□□□□ -1.84
TREX1Q9NSU2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TREX1Q9NSU2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 SNORD9-201ENST00000362566 104 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 SNORD3H-201ENST00000384486 214 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 MIR7-1-201ENST00000384871 110 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AL136116.1-201ENST00000403591 381 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 DHFRP5-201ENST00000406944 564 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 RN7SKP53-201ENST00000411337 315 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC017079.2-201ENST00000416102 485 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 HMGB3P5-201ENST00000428894 612 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 UBE2V2P3-201ENST00000433562 437 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 MRPS18BP2-201ENST00000434310 759 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 Z99127.2-201ENST00000441426 334 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AL606490.8-201ENST00000441624 319 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 TPMTP4-201ENST00000450749 678 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AP002345.1-201ENST00000456493 928 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 RPL7P48-201ENST00000461513 746 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC007537.2-201ENST00000472093 511 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC007688.1-201ENST00000475592 759 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC078817.1-201ENST00000492623 435 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 MTATP6P22-201ENST00000507369 598 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 FABP5P6-201ENST00000510588 409 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC026333.2-201ENST00000542164 106 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC007823.1-201ENST00000569932 1566 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC022387.2-201ENST00000604050 448 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 RNA5SP108-201ENST00000605921 117 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC069209.1-201ENST00000619282 651 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 AC022149.2-201ENST00000621061 203 ntBASIC3.57□□□□□ -1.84
TREX1Q9NSU2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TREX1Q9NSU2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AL133383.2-201ENST00000622958 2336 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 SEPT7P7-201ENST00000420492 1301 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 MIR153-1-201ENST00000384914 90 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 PTMAP5-201ENST00000393073 333 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AC127526.1-201ENST00000417526 366 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 RPS3AP46-201ENST00000448352 682 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 SNRPGP3-201ENST00000469405 227 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 FTH1P24-201ENST00000503502 462 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AC021146.1-201ENST00000511202 716 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 RNU6-491P-201ENST00000516099 110 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AC074029.2-201ENST00000551045 634 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 BNIP3P7-201ENST00000605641 516 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AC073111.2-201ENST00000605657 1075 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AC018754.1-201ENST00000607486 925 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AP003355.3-201ENST00000623465 114 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 MIR4278-201ENST00000636094 69 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 ZNF33CP-201ENST00000432492 2030 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AC000367.1-201ENST00000452711 1766 ntBASIC3.56□□□□□ -1.84
TREX1Q9NSU2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
TREX1Q9NSU2 AL592494.2-201ENST00000425455 1548 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 MTND4P10-201ENST00000446199 1363 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms