Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU6-483P-201ENST00000384088 108 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 RNU6-272P-201ENST00000411028 104 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 RNU2-6P-201ENST00000411404 190 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AMD1P2-201ENST00000412936 992 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 COX5BP7-201ENST00000414780 274 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 ZNF90P2-204ENST00000419323 1075 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 PIGFP2-201ENST00000421400 651 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AL355433.1-201ENST00000422804 300 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 NPM1P34-201ENST00000428821 893 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 NDUFA5P7-201ENST00000452914 242 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 RPL21P71-201ENST00000465598 459 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 MTCO3P9-201ENST00000506989 781 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 RNU6-150P-201ENST00000516237 95 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 RN7SKP283-201ENST00000517197 270 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 SNORA43.3-201ENST00000517240 103 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 IGLV2-28-201ENST00000520681 304 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 COX6B1P6-201ENST00000522347 255 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 HSPE1P2-201ENST00000554777 306 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 MTCO3P13-201ENST00000577757 781 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 MTCYBP13-201ENST00000578634 1093 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 MIR544B-201ENST00000582372 78 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 NRBF2P1-201ENST00000587407 859 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AL133338.2-201ENST00000604292 736 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 FRG1KP-201ENST00000623592 341 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC024614.3-201ENST00000637860 256 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC097461.1-201ENST00000568928 2821 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AC090017.1-201ENST00000548612 1779 ntBASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXP3Q9BZS1 AL157700.1-201ENST00000561973 1432 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 RNU6-251P-201ENST00000363235 104 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 U8.3-201ENST00000363321 132 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 RNA5SP132-201ENST00000364725 118 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 RNY4P34-201ENST00000364779 95 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 OR1L6-202ENST00000373684 1044 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 USP9YP36-201ENST00000424581 829 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC008850.1-201ENST00000427546 362 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC073069.1-201ENST00000428657 441 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 RPL19P16-201ENST00000433839 588 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 MTCO1P27-201ENST00000448269 226 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AL672138.1-201ENST00000450604 1015 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC106872.3-201ENST00000495104 446 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC112204.1-201ENST00000502591 103 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 Y_RNA.701-201ENST00000516812 110 ntBASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.66□□□□□ -1.5
FOXP3Q9BZS1 IGKV2-18-201ENST00000522607 343 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms