Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ARF4P2-201ENST00000430209 526 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 COX6B1P7-201ENST00000430845 235 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 RPS4XP4-201ENST00000443195 763 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 NANOGP10-201ENST00000453325 895 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC098824.1-201ENST00000453565 980 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 MTND2P28-201ENST00000457540 1044 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 RPL38P1-201ENST00000460914 211 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 UBE2V1P12-201ENST00000503954 474 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC010460.2-201ENST00000509054 677 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC021451.1-201ENST00000523498 1129 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AL121594.4-201ENST00000556211 1196 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 VN1R87P-201ENST00000596706 487 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 BRDTP1-201ENST00000605735 677 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC103710.3-201ENST00000608157 948 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 MIR7973-1-201ENST00000614683 76 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 STMN1P1-201ENST00000617809 440 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC004943.3-201ENST00000624116 600 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 ATE1-AS1-202ENST00000636460 506 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC058791.1-201ENST00000608412 3198 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC28BQ9BUN5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CCDC28BQ9BUN5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.84□□□□□ -1.8
CCDC28BQ9BUN5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CCDC28BQ9BUN5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 RNU5B-1-201ENST00000363286 116 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 RNU6-236P-201ENST00000363886 106 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 U6.112-201ENST00000384129 70 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 ZNF602P-201ENST00000405929 924 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 HSPE1P8-201ENST00000406997 288 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 SNORA11.3-201ENST00000408471 128 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 PTP4A1P5-201ENST00000420305 455 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 HIGD1AP4-201ENST00000430194 280 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 MTCO3P21-201ENST00000430791 643 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 BTF3P10-201ENST00000433415 495 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 RRM2P4-201ENST00000441721 562 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 SEPT14P24-201ENST00000447236 180 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 DUXAP8-207ENST00000456786 622 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 RPL23AP24-201ENST00000458203 385 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 TRBV8-2-201ENST00000475637 270 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC104687.1-201ENST00000485829 412 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC008802.1-201ENST00000519121 791 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 OR7E13P-201ENST00000526052 910 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AP002812.4-201ENST00000532139 286 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC068831.4-201ENST00000556118 109 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC044860.2-201ENST00000561005 179 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC090877.1-201ENST00000561418 344 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 ATP5F1P7-201ENST00000567330 760 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 MIR4789-201ENST00000577469 82 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 MIR4509-3-201ENST00000578671 94 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC022884.3-201ENST00000579571 248 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 MIR4509-2-201ENST00000583920 94 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AL022067.1-201ENST00000602426 454 ntBASIC3.83□□□□□ -1.8
CCDC28BQ9BUN5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms