Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 UGT2B26P-201ENST00000508672 1613 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 RNA5SP453-201ENST00000362503 119 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 SNORA17.1-201ENST00000362945 126 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 Y_RNA.279-201ENST00000364763 95 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC004690.1-201ENST00000418216 328 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 HSPD1P12-201ENST00000429127 1069 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 NANOGP6-201ENST00000429190 847 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 GSTM5P1-201ENST00000434751 660 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC092809.1-201ENST00000441469 474 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 YWHAQP9-201ENST00000445891 512 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 Z82190.1-201ENST00000454534 490 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 NF1P3-201ENST00000457709 450 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC021660.1-201ENST00000465006 554 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 RPL5P22-201ENST00000480199 884 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC098583.1-201ENST00000480875 255 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 GLUD1P3-202ENST00000508551 200 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 MEMO1P5-201ENST00000604810 406 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AL162730.1-201ENST00000605734 292 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 FAM25E-202ENST00000608562 189 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC083809.1-201ENST00000615051 472 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC006065.6-201ENST00000625201 545 ntBASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 PANDAR-201ENST00000629595 1506 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 RPSAP35-201ENST00000413753 818 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 RAD23BP1-201ENST00000421404 1227 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 BX890604.2-201ENST00000427883 474 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC005534.2-201ENST00000431047 433 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 RPL12P17-201ENST00000432393 498 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC099670.2-201ENST00000435130 321 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 NDUFA5P4-201ENST00000436704 385 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 PGBD4P3-201ENST00000440731 581 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 RPS7P5-201ENST00000441482 581 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 GAPDHP25-201ENST00000447061 1001 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 NIPA2P5-201ENST00000452282 464 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 MTND1P3-201ENST00000484956 952 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC020890.1-201ENST00000491837 504 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 RPS17P5-201ENST00000498293 408 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 KCTD9P5-201ENST00000504141 1170 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 MTCO3P9-201ENST00000506989 781 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AP000889.1-201ENST00000530968 660 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AP003072.1-201ENST00000531740 145 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC093519.1-201ENST00000566109 298 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC012182.1-201ENST00000570133 895 ntBASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNGAP1Q96PV0 AC011840.5-201ENST00000582125 771 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms