Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC095057.3-201ENST00000567102 1157 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC090312.1-201ENST00000580637 348 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC133794.1-201ENST00000602731 914 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC068620.3-201ENST00000602749 560 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AC009318.3-201ENST00000616916 503 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AL354798.1-201ENST00000622505 329 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AP003072.4-201ENST00000624580 310 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 AF001550.2-201ENST00000636643 217 ntBASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
C9orf40Q8IXQ3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC134882.1-201ENST00000603738 1676 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC093535.2-201ENST00000624769 2326 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC074029.4-201ENST00000624796 1859 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 RNU6-1339P-201ENST00000363574 91 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 MIR199A2-201ENST00000385289 110 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 RNU6-1176P-201ENST00000390955 107 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AL355143.1-201ENST00000407101 841 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AL024507.1-201ENST00000412741 274 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC013262.1-201ENST00000426710 252 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 APOOP2-201ENST00000461561 539 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 RPS4XP6-201ENST00000477670 797 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 GAPDHP36-201ENST00000480688 918 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 NPM1P41-201ENST00000512920 831 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC008562.1-201ENST00000521763 330 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 MTND5P21-201ENST00000531961 522 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 HSPE1P5-201ENST00000561489 272 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 MIR4789-201ENST00000577469 82 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 EIF1P6-201ENST00000600054 334 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AL020997.2-201ENST00000602607 184 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 NTAN1P1-201ENST00000603150 646 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC110741.2-201ENST00000605278 268 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC018645.2-201ENST00000609151 472 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC005156.1-201ENST00000613371 573 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC022031.1-201ENST00000585985 2593 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 AC104446.1-201ENST00000613728 1321 ntBASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
C9orf40Q8IXQ3 CYP1D1P-201ENST00000416662 1433 ntBASIC3.59□□□□□ -1.84
C9orf40Q8IXQ3 ZNF849P-201ENST00000594711 1566 ntBASIC3.59□□□□□ -1.84
C9orf40Q8IXQ3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 U1.1-201ENST00000384101 164 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 RNU1-89P-201ENST00000384592 164 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 SNORD65C-201ENST00000390962 71 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 RN7SKP56-201ENST00000410513 331 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 RPL17P36-201ENST00000420302 549 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC241520.1-201ENST00000422654 1099 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC096638.2-201ENST00000434965 711 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC009263.1-201ENST00000441193 1239 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 DNAJC19P8-201ENST00000452887 259 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AL139099.1-201ENST00000497398 403 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 AC026726.1-201ENST00000512859 601 ntBASIC3.58□□□□□ -1.84
C9orf40Q8IXQ3 SCARNA14-201ENST00000516903 136 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms