Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC008638.1-201ENST00000506035 866 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 RNU6-488P-201ENST00000515918 99 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 ARL2BPP5-201ENST00000523141 481 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC126177.5-201ENST00000549599 178 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AL390334.1-201ENST00000556395 450 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 MEMO1P5-201ENST00000604810 406 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 HSPE1P14-201ENST00000605812 302 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AL390208.1-201ENST00000605885 644 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AP002505.2-201ENST00000623585 696 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AP002907.1-201ENST00000606361 1430 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC022031.1-201ENST00000585985 2593 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC002525.1-201ENST00000624392 1622 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 FARSBP1-201ENST00000435808 1778 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC008033.1-201ENST00000216407 1162 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 Y_RNA.295-201ENST00000364918 102 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 RNU6-444P-201ENST00000383988 108 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 RNU6-769P-201ENST00000384407 104 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 MIR105-1-201ENST00000385222 81 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AL078604.1-201ENST00000404609 466 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 RNU2-22P-201ENST00000411266 212 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 OR51A5P-201ENST00000415429 942 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 YWHAZP8-201ENST00000436935 731 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AZGP1P2-201ENST00000454506 345 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC091951.2-201ENST00000500762 203 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC112204.1-201ENST00000502591 103 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 TMEM251P1-201ENST00000503717 318 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC006499.3-201ENST00000506077 748 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 STMN1P2-201ENST00000508435 439 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 SAP18P1-201ENST00000512058 390 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 RNU6-347P-201ENST00000516658 105 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 RNU2-46P-201ENST00000517038 113 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC027308.1-201ENST00000517993 110 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AP003467.2-201ENST00000520175 319 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AP003122.4-201ENST00000530980 758 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AL157394.1-201ENST00000562983 1224 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 HMGB1P33-201ENST00000563485 527 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC122134.1-201ENST00000565664 1104 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 MAGOH2P-202ENST00000584384 429 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 HMGN1P30-201ENST00000589286 268 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 OR7E18P-201ENST00000592589 702 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 C8orf59P2-201ENST00000603441 271 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 BNIP3P9-201ENST00000603714 553 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AL365503.1-201ENST00000605247 905 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AL158211.4-201ENST00000606988 584 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC008536.2-201ENST00000607284 349 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 AC009033.1-201ENST00000624279 431 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.27□□□□□ -1.57
TRIM48Q8IWZ4 LRRC77P-213ENST00000637727 880 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms