Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC011816.2-201ENST00000607089 556 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC004775.1-201ENST00000607389 753 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC083809.1-201ENST00000615051 472 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC006338.2-201ENST00000616864 791 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC018816.2-201ENST00000621460 353 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 C2orf27A-204ENST00000623058 969 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 RNA5SP283-201ENST00000365604 119 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 RNU1-13P-201ENST00000384499 162 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 ZNF602P-201ENST00000405929 924 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 LINC01347-201ENST00000417964 355 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 HMGB3P20-201ENST00000417997 600 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 TCEA1P2-201ENST00000420496 906 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 COX6CP17-201ENST00000421389 185 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 RPL30P3-201ENST00000424262 333 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 OR4C10P-201ENST00000434991 931 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 MTCO3P43-201ENST00000440974 771 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 CABYRP1-201ENST00000465493 1045 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 RPS4XP22-201ENST00000480755 780 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 OR52A4P-202ENST00000481634 799 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 AC093663.2-201ENST00000484625 313 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 RPL30P11-201ENST00000495304 339 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 AGGF1P6-201ENST00000569213 976 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 AL450270.1-201ENST00000606160 391 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 AC090617.9-201ENST00000623751 147 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 ZNF826P-207ENST00000622273 1910 ntBASIC3.91□□□□□ -1.78
CCDC50Q8IVM0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC50Q8IVM0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.9□□□□□ -1.78
CCDC50Q8IVM0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC50Q8IVM0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 RNA5SP424-201ENST00000390988 115 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC017079.2-201ENST00000416102 485 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 MOB1AP1-201ENST00000430903 535 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 SETD6P1-201ENST00000444575 317 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC006480.1-201ENST00000449887 378 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 OR9M1P-201ENST00000459641 921 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC087312.1-201ENST00000471411 480 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 MTATP6P22-201ENST00000507369 598 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC010285.3-201ENST00000511668 676 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC008011.1-201ENST00000545989 227 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC093014.1-201ENST00000548926 724 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AL161713.1-201ENST00000555538 145 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC006960.3-201ENST00000561845 705 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 NF1P5-201ENST00000588287 448 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 KLKP1-201ENST00000595979 403 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AL049634.3-201ENST00000604968 457 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 U6.48-201ENST00000618523 106 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 AL139811.1-201ENST00000424779 2299 ntBASIC3.9□□□□□ -1.79
CCDC50Q8IVM0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 Y_RNA.625-201ENST00000411256 107 ntBASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC50Q8IVM0 MORF4L1P7-201ENST00000426038 703 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms