Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDH1Q08174 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 AC124945.1-201ENST00000485133 188 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AP002453.1-201ENST00000492327 668 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 RPL23AP72-201ENST00000492447 435 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 BTF3P13-201ENST00000513224 490 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AC018797.3-201ENST00000513388 1241 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 RN7SKP256-201ENST00000517201 314 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDH1Q08174 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDH1Q08174 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDH1Q08174 AC092332.1-201ENST00000563684 829 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 OR1E3-201ENST00000575608 948 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 MIR3154-201ENST00000577829 84 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AL355816.1-201ENST00000607951 118 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 OR2L1P-202ENST00000641567 1023 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDH1Q08174 MTND5P33-201ENST00000571250 1450 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDH1Q08174 RBPJP2-201ENST00000618187 1444 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PCDH1Q08174 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 LARP1BP1-201ENST00000506036 1359 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDH1Q08174 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDH1Q08174 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH1Q08174 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDH1Q08174 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH1Q08174 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 Y_RNA.202-201ENST00000364083 110 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 RN7SKP171-201ENST00000364417 303 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 Y_RNA.615-201ENST00000410769 117 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 RNU2-22P-201ENST00000411266 212 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 NPM1P40-201ENST00000412758 733 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 CHEK2P3-201ENST00000416118 248 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AL451054.2-201ENST00000420896 202 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC096632.1-201ENST00000427395 310 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 RPL12P16-201ENST00000431098 498 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 KRT8P51-201ENST00000438938 274 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 RPL5P7-201ENST00000444235 813 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 FTLP8-201ENST00000446770 267 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC073415.1-201ENST00000449240 153 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 PPIAP7-201ENST00000454070 489 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC118758.1-202ENST00000454719 225 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 Y_RNA.631-201ENST00000459607 101 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 RN7SL254P-201ENST00000460609 284 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH1Q08174 AC112484.3-201ENST00000505910 329 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 KLHL2P1-201ENST00000508691 521 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AP000620.1-201ENST00000527147 504 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AC026464.5-201ENST00000562497 722 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 MIR3146-201ENST00000580367 79 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AC006116.10-201ENST00000591836 581 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDH1Q08174 SNRPGP17-201ENST00000603780 214 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC103710.3-201ENST00000608157 948 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDH1Q08174 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH1Q08174 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDH1Q08174 AC138305.3-201ENST00000624988 240 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 AC111152.1-202ENST00000635848 339 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH1Q08174 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCDH1Q08174 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH1Q08174 GNL2P1-201ENST00000451274 2190 ntBASIC5.8□□□□□ -1.48
PCDH1Q08174 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH1Q08174 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PCDH1Q08174 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms