Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC007823.1-201ENST00000569932 1566 ntBASIC3.21□□□□□ -1.9
H3F3AP84243 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
H3F3AP84243 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
H3F3AP84243 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
H3F3AP84243 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
H3F3AP84243 MIR184-201ENST00000384962 84 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 RNU6-328P-201ENST00000390887 106 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
H3F3AP84243 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 AC114814.2-201ENST00000419195 485 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.2□□□□□ -1.9
H3F3AP84243 OSTCP5-201ENST00000425293 453 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 TXNP1-201ENST00000441872 371 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.2□□□□□ -1.9
H3F3AP84243 RPS15AP29-201ENST00000445539 400 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.2□□□□□ -1.9
H3F3AP84243 CFTRP1-201ENST00000456646 183 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 AC106707.2-201ENST00000484182 374 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 HMGB3P14-201ENST00000494195 599 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 FTH1P24-201ENST00000503502 462 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
H3F3AP84243 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.2□□□□□ -1.9
H3F3AP84243 MTCO1P30-201ENST00000515244 580 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 RNU2-58P-201ENST00000516403 183 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 RNU1-45P-201ENST00000517191 141 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.2□□□□□ -1.9
H3F3AP84243 TRMT10BP1-201ENST00000519377 943 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.2□□□□□ -1.9
H3F3AP84243 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.2□□□□□ -1.9
H3F3AP84243 AP006245.1-201ENST00000522549 120 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 GTF2IP22-201ENST00000554443 182 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.2□□□□□ -1.9
H3F3AP84243 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.2□□□□□ -1.9
H3F3AP84243 AC011492.1-201ENST00000600023 315 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.2□□□□□ -1.9
H3F3AP84243 AL355816.1-201ENST00000607951 118 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 AC006946.3-201ENST00000609791 756 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 AC012531.5-201ENST00000611375 151 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.2□□□□□ -1.9
H3F3AP84243 AC119674.1-212ENST00000641155 993 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 AC009093.8-201ENST00000641769 292 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 OR6C71P-202ENST00000641886 1107 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 GABPAP-201ENST00000419271 1356 ntBASIC3.2□□□□□ -1.9
H3F3AP84243 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
H3F3AP84243 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
H3F3AP84243 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
H3F3AP84243 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
H3F3AP84243 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
H3F3AP84243 USP8P1-201ENST00000494673 3183 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 RNU6-1251P-201ENST00000364502 107 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 SNORA73.2-201ENST00000364946 201 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.19□□□□□ -1.9
H3F3AP84243 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.19□□□□□ -1.9
H3F3AP84243 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.19□□□□□ -1.9
H3F3AP84243 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.19□□□□□ -1.9
H3F3AP84243 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
H3F3AP84243 ARF4P2-201ENST00000430209 526 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.19□□□□□ -1.9
H3F3AP84243 AC074367.1-201ENST00000438685 1125 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC073387.1-201ENST00000453261 709 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.19□□□□□ -1.9
H3F3AP84243 FTH1P2-201ENST00000466086 412 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 RN7SL594P-201ENST00000470590 287 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC023598.1-201ENST00000472521 361 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC084357.1-201ENST00000473404 255 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.19□□□□□ -1.9
H3F3AP84243 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 MTATP6P22-201ENST00000507369 598 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC113398.2-201ENST00000507630 558 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.19□□□□□ -1.9
H3F3AP84243 SNORA26.10-201ENST00000516427 141 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC026403.1-201ENST00000518938 295 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
H3F3AP84243 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.19□□□□□ -1.9
H3F3AP84243 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.19□□□□□ -1.9
H3F3AP84243 AL121576.1-201ENST00000556055 276 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.19□□□□□ -1.9
H3F3AP84243 AC006270.2-201ENST00000578523 652 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.19□□□□□ -1.9
H3F3AP84243 AC010591.1-201ENST00000603941 649 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 RMST_8.1-201ENST00000610287 165 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AL161637.1-201ENST00000622380 412 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.19□□□□□ -1.9
H3F3AP84243 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.19□□□□□ -1.9
H3F3AP84243 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
H3F3AP84243 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
H3F3AP84243 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
H3F3AP84243 AF127577.6-201ENST00000623352 2191 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 AC073073.2-201ENST00000609827 2578 ntBASIC3.19□□□□□ -1.9
H3F3AP84243 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms